RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CD33P20138 364 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 MALP21145 153 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 PLPPR1Q8TBJ4 325 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 YAE1D1Q9NRH1 226 aa16.53■□□□□ 0.24
SNX27-204ENST00000458013 CD7P09564 240 aa16.52■□□□□ 0.24
SNX27-204ENST00000458013 Q6ZT83 130 aa16.52■□□□□ 0.24
SNX27-204ENST00000458013 RIPPLY3P57055 190 aa16.52■□□□□ 0.24
SNX27-204ENST00000458013 IGHV2OR16-5A0A0B4J2B6 119 aa16.52■□□□□ 0.24
SNX27-204ENST00000458013 SPAG8Q99932 426 aaPredicted RBP16.52■□□□□ 0.24
SNX27-204ENST00000458013 C1QL4Q86Z23 238 aa16.52■□□□□ 0.23
SNX27-204ENST00000458013 DPH3P1Q9H4G8 78 aa16.52■□□□□ 0.23
SNX27-204ENST00000458013 C7orf69Q9H7B7 122 aa16.52■□□□□ 0.23
SNX27-204ENST00000458013 LOC390937A0A1W2PQ73 354 aa16.52■□□□□ 0.23
SNX27-204ENST00000458013 PYYP10082 97 aa16.52■□□□□ 0.23
SNX27-204ENST00000458013 SAA2-SAA4A0A096LPE2 208 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 SAA2P0DJI9 122 aaPredicted RBP16.51■□□□□ 0.23
SNX27-204ENST00000458013 OR10J3Q5JRS4 329 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 CTHRC1Q96CG8 243 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 ABHD17AQ96GS6 310 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 TRBV9A0A0B4J1U6 114 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 HIGD1CA8MV81 97 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 HOXA5P20719 270 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 FXYD7P58549 80 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 MTCL1Q9Y4B5 1905 aaKnown RBP16.51■□□□□ 0.23
SNX27-204ENST00000458013 FOXH1O75593 365 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 MEF2CQ06413 473 aaPredicted RBP16.51■□□□□ 0.23
SNX27-204ENST00000458013 FMC1Q96HJ9 113 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 FER1L6-AS1Q8NA97 138 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 COL11A2P13942 1736 aaPredicted RBP16.51■□□□□ 0.23
SNX27-204ENST00000458013 C1QTNF9P0C862 333 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 COPS9Q8WXC6 57 aa16.51■□□□□ 0.23
SNX27-204ENST00000458013 A0A0G2JK05 382 aa16.5■□□□□ 0.23
SNX27-204ENST00000458013 H3BUT2 72 aa16.5■□□□□ 0.23
SNX27-204ENST00000458013 FAM168AQ92567 244 aa16.5■□□□□ 0.23
SNX27-204ENST00000458013 PEF1Q9UBV8 284 aaKnown RBP16.5■□□□□ 0.23
SNX27-204ENST00000458013 SRP19P09132 144 aaKnown RBP16.5■□□□□ 0.23
SNX27-204ENST00000458013 MESP1Q9BRJ9 268 aa16.5■□□□□ 0.23
SNX27-204ENST00000458013 SDF2L1Q9HCN8 221 aa16.5■□□□□ 0.23
SNX27-204ENST00000458013 ELOVL5Q9NYP7 299 aa16.5■□□□□ 0.23
SNX27-204ENST00000458013 C21orf62Q9NYP8 219 aa16.5■□□□□ 0.23
SNX27-204ENST00000458013 LSM4Q9Y4Z0 139 aaKnown RBP16.5■□□□□ 0.23
SNX27-204ENST00000458013 TRAV14DV4A0A0A6YYC5 116 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 C9orf106Q8NAJ2 232 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 CNTRLQ7Z7A1 2325 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 GZMBP10144 247 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 PRR32B1ATL7 298 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 SPCS1Q9Y6A9 102 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 TMEM50AO95807 157 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 EFEMP2O95967 443 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 PSG7Q13046 419 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 SAPCD1Q5SSQ6 148 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 LTBRP36941 435 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 CFAP161Q6P656 301 aa16.49■□□□□ 0.23
SNX27-204ENST00000458013 TRAV2A0A0B4J234 112 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 ZNF815PA8K554 130 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 ASCL2Q99929 193 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 GSN-AS1Q9NRJ2 163 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 IFNL4K9M1U5 179 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 AICDAQ9GZX7 198 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 A6NNC1 897 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 CNTFRP26992 372 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 IGKV1D-13A0A0B4J2D9 117 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 IGKV1-13P0DP09 117 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 UCP3P55916 312 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 STHQ8IWL8 128 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 LYZL4Q96KX0 146 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 SERF1AO75920 110 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 ANKRD36A6QL64 1941 aa16.48■□□□□ 0.23
SNX27-204ENST00000458013 KBTBD11-OT1A0A1B0GTJ5 212 aa16.47■□□□□ 0.23
SNX27-204ENST00000458013 UMODP07911 640 aa16.47■□□□□ 0.23
SNX27-204ENST00000458013 VSIRQ9H7M9 311 aa16.47■□□□□ 0.23
SNX27-204ENST00000458013 KIAA0100Q14667 2235 aaKnown RBP16.47■□□□□ 0.23
SNX27-204ENST00000458013 TRAV21A0A0B4J279 112 aa16.47■□□□□ 0.23
SNX27-204ENST00000458013 MDC1Q14676 2089 aaKnown RBP16.47■□□□□ 0.23
SNX27-204ENST00000458013 TRAV5A0A0B4J249 113 aa16.47■□□□□ 0.23
SNX27-204ENST00000458013 COX5BP10606 129 aa16.47■□□□□ 0.23
SNX27-204ENST00000458013 UBR3Q6ZT12 1888 aa16.47■□□□□ 0.23
SNX27-204ENST00000458013 DERL1Q9BUN8 251 aa16.46■□□□□ 0.23
SNX27-204ENST00000458013 VDAC2P45880 294 aaPredicted RBP16.46■□□□□ 0.23
SNX27-204ENST00000458013 ZNF415Q09FC8 603 aa16.46■□□□□ 0.23
SNX27-204ENST00000458013 DPM3Q9P2X0 92 aa16.46■□□□□ 0.23
SNX27-204ENST00000458013 A0A1B0GUT8 65 aa16.46■□□□□ 0.23
SNX27-204ENST00000458013 LDLRAD2Q5SZI1 272 aa16.46■□□□□ 0.23
SNX27-204ENST00000458013 TMEM42Q69YG0 159 aa16.46■□□□□ 0.23
SNX27-204ENST00000458013 TTC9CQ8N5M4 171 aa16.46■□□□□ 0.23
SNX27-204ENST00000458013 IZUMO1RA6ND01 250 aa16.46■□□□□ 0.23
SNX27-204ENST00000458013 NUTF2P61970 127 aaKnown RBP16.46■□□□□ 0.23
SNX27-204ENST00000458013 CKAP5Q14008 2032 aa16.46■□□□□ 0.22
SNX27-204ENST00000458013 C19orf24Q9BVV8 132 aa16.45■□□□□ 0.22
SNX27-204ENST00000458013 CD8AP01732 235 aa16.45■□□□□ 0.22
SNX27-204ENST00000458013 DMRTC2Q8IXT2 367 aaPredicted RBP16.45■□□□□ 0.22
SNX27-204ENST00000458013 TRAV8-2A0A0B4J237 113 aa16.45■□□□□ 0.22
SNX27-204ENST00000458013 FAM89BQ8N5H3 189 aa16.45■□□□□ 0.22
SNX27-204ENST00000458013 OR10W1Q8NGF6 305 aa16.45■□□□□ 0.22
SNX27-204ENST00000458013 NHP2Q9NX24 153 aaKnown RBP16.45■□□□□ 0.22
SNX27-204ENST00000458013 GPX4P36969 197 aaPredicted RBP16.45■□□□□ 0.22
SNX27-204ENST00000458013 LY6DQ14210 128 aa16.45■□□□□ 0.22
SNX27-204ENST00000458013 C18orf12Q96KH6 178 aa16.45■□□□□ 0.22
SNX27-204ENST00000458013 VKORC1Q9BQB6 163 aa16.45■□□□□ 0.22
SNX27-204ENST00000458013 GP6Q9HCN6 339 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms