RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 FAM219AQ8IW50 185 aa17.72■□□□□ 0.43
CBX3-204ENST00000456948 TMEM222Q9H0R3 208 aa17.72■□□□□ 0.43
CBX3-204ENST00000456948 C5orf66Q9H5L9 145 aa17.72■□□□□ 0.43
CBX3-204ENST00000456948 PLEKHA3Q9HB20 300 aa17.72■□□□□ 0.43
CBX3-204ENST00000456948 PPP5D1E7EU14 171 aa17.71■□□□□ 0.43
CBX3-204ENST00000456948 IFNA17P01571 189 aa17.71■□□□□ 0.43
CBX3-204ENST00000456948 IGHV3-23P01764 117 aa17.71■□□□□ 0.43
CBX3-204ENST00000456948 CLEC3BP05452 202 aa17.71■□□□□ 0.43
CBX3-204ENST00000456948 INPP1P49441 399 aa17.71■□□□□ 0.43
CBX3-204ENST00000456948 PRCDQ00LT1 54 aa17.71■□□□□ 0.43
CBX3-204ENST00000456948 CCDC190Q86UF4 302 aa17.71■□□□□ 0.43
CBX3-204ENST00000456948 GPHB5Q86YW7 130 aa17.71■□□□□ 0.43
CBX3-204ENST00000456948 CDS2O95674 445 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 IGLV1-51P01701 117 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 OR5AC1P0C628 307 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 GP9P14770 177 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 SPNP16150 400 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 ETV6P41212 452 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 OR1P1Q8NH06 330 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 ATP6V0BQ99437 205 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 ENY2Q9NPA8 101 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 GAR1Q9NY12 217 aaKnown RBP17.7■□□□□ 0.42
CBX3-204ENST00000456948 CACFD1Q9UGQ2 172 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 V9GYH0 126 aa17.7■□□□□ 0.42
CBX3-204ENST00000456948 CRYM-AS1A6NIL9 109 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 LGALS9O00182 355 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 OR2C1O95371 312 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 ANXA3P12429 323 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 SNCAP37840 140 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 PLET1Q6UQ28 207 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 SLC35G3Q8N808 338 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 RBPMSQ93062 196 aaKnown RBP17.69■□□□□ 0.42
CBX3-204ENST00000456948 CCDC140Q96MF4 163 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 SMAD5-AS1Q9Y6J3 95 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 S4R3C0 116 aa17.69■□□□□ 0.42
CBX3-204ENST00000456948 ZNF320A2RRD8 509 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 MFSD2BA6NFX1 497 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 DBX1A6NMT0 343 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 IGKV1-5P01602 117 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 CSN3P07498 182 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 SUB1P53999 127 aaKnown RBP eCLIP17.68■□□□□ 0.42
CBX3-204ENST00000456948 LCN12Q6JVE5 192 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 OR2C3Q8N628 320 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 OR2K2Q8NGT1 345 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 ZNF502Q8TBZ5 544 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 DYNLRB2Q8TF09 96 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 B9D2Q9BPU9 175 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 PALMDQ9NP74 551 aa17.68■□□□□ 0.42
CBX3-204ENST00000456948 LSM4Q9Y4Z0 139 aaKnown RBP17.68■□□□□ 0.42
CBX3-204ENST00000456948 GPR183P32249 361 aa17.67■□□□□ 0.42
CBX3-204ENST00000456948 KLF9Q13886 244 aaPredicted RBP17.67■□□□□ 0.42
CBX3-204ENST00000456948 ZNF57Q68EA5 555 aaPredicted RBP17.67■□□□□ 0.42
CBX3-204ENST00000456948 SPSB3Q6PJ21 355 aa17.67■□□□□ 0.42
CBX3-204ENST00000456948 GLYATL2Q8WU03 294 aa17.67■□□□□ 0.42
CBX3-204ENST00000456948 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.67■□□□□ 0.42
CBX3-204ENST00000456948 C21orf62Q9NYP8 219 aa17.67■□□□□ 0.42
CBX3-204ENST00000456948 A0A0B4J293 547 aa17.66■□□□□ 0.42
CBX3-204ENST00000456948 HLA-AP01891 365 aaKnown RBP17.66■□□□□ 0.42
CBX3-204ENST00000456948 AKR1C4P17516 323 aa17.66■□□□□ 0.42
CBX3-204ENST00000456948 SRPXP78539 464 aa17.66■□□□□ 0.42
CBX3-204ENST00000456948 ZNF79Q15937 498 aa17.66■□□□□ 0.42
CBX3-204ENST00000456948 IL34Q6ZMJ4 242 aa17.66■□□□□ 0.42
CBX3-204ENST00000456948 ZNF114Q8NC26 417 aa17.66■□□□□ 0.42
CBX3-204ENST00000456948 TRIM63Q969Q1 353 aa17.66■□□□□ 0.42
CBX3-204ENST00000456948 BSCL2Q96G97 398 aaPredicted RBP17.66■□□□□ 0.42
CBX3-204ENST00000456948 SLC25A21Q9BQT8 299 aaPredicted RBP17.66■□□□□ 0.42
CBX3-204ENST00000456948 DMRT1Q9Y5R6 373 aa17.66■□□□□ 0.42
CBX3-204ENST00000456948 ST8SIA3O43173 380 aa17.65■□□□□ 0.42
CBX3-204ENST00000456948 P0C879 139 aa17.65■□□□□ 0.42
CBX3-204ENST00000456948 TMEM268Q5VZI3 342 aa17.65■□□□□ 0.42
CBX3-204ENST00000456948 TRIQKQ629K1 86 aa17.65■□□□□ 0.42
CBX3-204ENST00000456948 IL22RA2Q969J5 263 aa17.65■□□□□ 0.42
CBX3-204ENST00000456948 MISP3Q96FF7 219 aa17.65■□□□□ 0.42
CBX3-204ENST00000456948 GALNT14Q96FL9 552 aa17.65■□□□□ 0.42
CBX3-204ENST00000456948 TECRQ9NZ01 308 aaKnown RBP17.65■□□□□ 0.42
CBX3-204ENST00000456948 TMEM56-RWDD3S4R434 201 aa17.65■□□□□ 0.42
CBX3-204ENST00000456948 TGOLN2O43493 480 aa17.64■□□□□ 0.41
CBX3-204ENST00000456948 NHLRC4P0CG21 123 aaPredicted RBP17.64■□□□□ 0.41
CBX3-204ENST00000456948 HOXA1P49639 335 aaPredicted RBP17.64■□□□□ 0.41
CBX3-204ENST00000456948 IZUMO4Q1ZYL8 232 aa17.64■□□□□ 0.41
CBX3-204ENST00000456948 Q56UQ5 140 aa17.64■□□□□ 0.41
CBX3-204ENST00000456948 SELENOHQ8IZQ5 122 aaKnown RBP17.64■□□□□ 0.41
CBX3-204ENST00000456948 SCARB1Q8WTV0 552 aa17.64■□□□□ 0.41
CBX3-204ENST00000456948 INS-IGF2F8WCM5 200 aa17.63■□□□□ 0.41
CBX3-204ENST00000456948 GTSCR1Q86UQ5 136 aa17.63■□□□□ 0.41
CBX3-204ENST00000456948 UBAC2Q8NBM4 344 aa17.63■□□□□ 0.41
CBX3-204ENST00000456948 TXN2Q99757 166 aa17.63■□□□□ 0.41
CBX3-204ENST00000456948 UFC1Q9Y3C8 167 aa17.63■□□□□ 0.41
CBX3-204ENST00000456948 OR2T8A6NH00 312 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 C2orf70A6NJV1 201 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 CORTO00230 105 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 FOLR2P14207 255 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 MFAP4P55083 255 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 SPCS3P61009 180 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 TMED4Q7Z7H5 227 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 HAPLN4Q86UW8 402 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 LGI3Q8N145 548 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 OR52E5Q8NH55 327 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 MARC2Q969Z3 335 aa17.62■□□□□ 0.41
CBX3-204ENST00000456948 SRRQ9GZT4 340 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms