RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 IZUMO4Q1ZYL8 232 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 KLK9Q2XQG4 91 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 HAPLN4Q86UW8 402 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 TMEM222Q9H0R3 208 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 C5orf66Q9H5L9 145 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 PLEKHA3Q9HB20 300 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 SLC2A8Q9NY64 477 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 KLK9Q9UKQ9 250 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 F11RQ9Y624 299 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 V9GYH0 126 aa13.81□□□□□ -0.2
PDLIM2-215ENST00000456545 MFSD2BA6NFX1 497 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 IGKV1-5P01602 117 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 IGLV1-51P01701 117 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 GP9P14770 177 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 ZNF57Q68EA5 555 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 PLET1Q6UQ28 207 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 CCDC190Q86UF4 302 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 SLC35G3Q8N808 338 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 VN1R17PQ8TDU5 208 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 CCDC140Q96MF4 163 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 ENY2Q9NPA8 101 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 ZC4H2Q9NQZ6 224 aa13.8□□□□□ -0.2
PDLIM2-215ENST00000456545 IGHV3-21A0A0B4J1V1 117 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 CRYM-AS1A6NIL9 109 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 CSN3P07498 182 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 AKR1C4P17516 323 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 GPR183P32249 361 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 SNCAP37840 140 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 PRCDQ00LT1 54 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 GPHB5Q86YW7 130 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 DYNLRB2Q8TF09 96 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 MISP3Q96FF7 219 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 SMAD5-AS1Q9Y6J3 95 aa13.79□□□□□ -0.2
PDLIM2-215ENST00000456545 CDS2O95674 445 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 KLF9Q13886 244 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 ZNF79Q15937 498 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 SPINK9Q5DT21 86 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 TMEM268Q5VZI3 342 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 IL34Q6ZMJ4 242 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 FAM219AQ8IW50 185 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 OR2C3Q8N628 320 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 UBAC2Q8NBM4 344 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 OR1P1Q8NH06 330 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 ZNF502Q8TBZ5 544 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 GLYATL2Q8WU03 294 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 RBPMSQ93062 196 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 LSM4Q9Y4Z0 139 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 DMRT1Q9Y5R6 373 aa13.78□□□□□ -0.2
PDLIM2-215ENST00000456545 A0A0B4J293 547 aa13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 ST8SIA3O43173 380 aa13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 ANXA3P12429 323 aa13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 ETV6P41212 452 aa13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 HOXA1P49639 335 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 Q56UQ5 140 aa13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 LCN12Q6JVE5 192 aa13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 SELENOHQ8IZQ5 122 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 B9D2Q9BPU9 175 aa13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 C21orf62Q9NYP8 219 aa13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 SIGLEC8Q9NYZ4 499 aa13.77□□□□□ -0.21
PDLIM2-215ENST00000456545 SORL1Q92673 2214 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 OR2T8A6NH00 312 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 LGALS9O00182 355 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 SUB1P53999 127 aaKnown RBP eCLIP13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 MFAP2P55001 183 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 TRIQKQ629K1 86 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 TMED4Q7Z7H5 227 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 SCARB1Q8WTV0 552 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 DEDD2Q8WXF8 326 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 TRIM63Q969Q1 353 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 PINX1Q96BK5 328 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 PALMDQ9NP74 551 aa13.76□□□□□ -0.21
PDLIM2-215ENST00000456545 IGHV3-35A0A0C4DH35 117 aa13.75□□□□□ -0.21
PDLIM2-215ENST00000456545 TGOLN2O43493 480 aa13.75□□□□□ -0.21
PDLIM2-215ENST00000456545 P0C879 139 aa13.75□□□□□ -0.21
PDLIM2-215ENST00000456545 FOLR2P14207 255 aa13.75□□□□□ -0.21
PDLIM2-215ENST00000456545 BSCL2Q96G97 398 aaPredicted RBP13.75□□□□□ -0.21
PDLIM2-215ENST00000456545 GAR1Q9NY12 217 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-215ENST00000456545 TGP01266 2768 aa13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 A0A0G2JRQ6 117 aa13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 C2orf70A6NJV1 201 aa13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 MFAP4P55083 255 aa13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 SPSB3Q6PJ21 355 aa13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 OR2K2Q8NGT1 345 aa13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 LHFPL5Q8TAF8 219 aa13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 GALNT14Q96FL9 552 aa13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 SLC25A21Q9BQT8 299 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 SRRQ9GZT4 340 aa13.74□□□□□ -0.21
PDLIM2-215ENST00000456545 PIGBOS1A0A0B4J2F0 54 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 K7EIM0 57 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 CBLN1P23435 193 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 SPCS3P61009 180 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 SRPXP78539 464 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 TMEM187Q14656 261 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 GTSCR1Q86UQ5 136 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 LGI3Q8N145 548 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 ZNF114Q8NC26 417 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 IL22RA2Q969J5 263 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 TMEM230Q96A57 120 aa13.73□□□□□ -0.21
PDLIM2-215ENST00000456545 GPR146Q96CH1 333 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms