RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 PIGTQ969N2 578 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 SPSB4Q96A44 273 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 CITED2Q99967 270 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-218ENST00000456174 SCRT2Q9NQ03 307 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 SS18L2Q9UHA2 77 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 DOCK11Q5JSL3 2073 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 hCG_38984A0A1B0GV85 526 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 TNFRSF13BO14836 293 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-218ENST00000456174 ADAM20O43506 726 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 IGKV1D-33P01593 117 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 IGKV1-33P01594 117 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 SSTR5P35346 364 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 GNB1P62873 340 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 Q56UQ5 140 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 CRIP3Q6Q6R5 217 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 SPATA12Q7Z6I5 190 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 RBMXL3Q8N7X1 1067 aaKnown RBP6.33□□□□□ -1.4
HDAC9-218ENST00000456174 ZNF114Q8NC26 417 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 ZNF439Q8NDP4 499 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 ZNF418Q8TF45 676 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-218ENST00000456174 GATAD1Q8WUU5 269 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 ZC2HC1AQ96GY0 325 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 PMCHL2Q9BQD1 86 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 IL36GQ9NZH8 169 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 ZNF835Q9Y2P0 537 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 C3orf85A0A1B0GTC6 90 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 LRP5LA4QPB2 252 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 J3QR89 54 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 CRXO43186 299 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-218ENST00000456174 SERPINE2P07093 398 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 GUSBP1Q15486 140 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 OR8B8Q15620 311 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 C1QL2Q7Z5L3 287 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 SPACA3Q8IXA5 215 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 CNEP1R1Q8N9A8 125 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 C9orf106Q8NAJ2 232 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 ZBTB34Q8NCN2 500 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 VSTM2AQ8TAG5 236 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 ST6GALNAC6Q969X2 333 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 APOBEC3DQ96AK3 386 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-218ENST00000456174 GPR82Q96P67 336 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 RAB40CQ96S21 281 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 KCNIP1Q9NZI2 227 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 TP73-AS1Q9UF72 201 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 DCHS1Q96JQ0 3298 aa6.33□□□□□ -1.4
HDAC9-218ENST00000456174 A6NDN8 102 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 C11orf94C9JXX5 98 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 PAGE4O60829 102 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 IGHV1-2P23083 117 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 GPR183P32249 361 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 KIR2DL2P43627 348 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-218ENST00000456174 GNG4P50150 75 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 TGFBR3Q03167 851 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 TMEM42Q69YG0 159 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 ZNF695Q8IW36 515 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 FAM19A2Q8N3H0 131 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 OR10AG1Q8NH19 301 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 LSM10Q969L4 123 aaKnown RBP6.32□□□□□ -1.4
HDAC9-218ENST00000456174 MS4A6AQ9H2W1 248 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 KCNIP2Q9NS61 270 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 ERG28Q9UKR5 140 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 TRAPPC2LQ9UL33 140 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 SPTBN2O15020 2390 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 SVILO95425 2214 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 LAMA5O15230 3695 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 SPENQ96T58 3664 aaKnown RBP6.32□□□□□ -1.4
HDAC9-218ENST00000456174 PRRC2CQ9Y520 2896 aaKnown RBP6.32□□□□□ -1.4
HDAC9-218ENST00000456174 TRAV38-1A0A0B4J264 116 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 ZNF816-ZNF321PA0A0X1KG74 233 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-218ENST00000456174 BMPR1BO00238 502 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 NGFP01138 241 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 GLI4P10075 376 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 GATA3P23771 443 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 MALLQ13021 153 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 Q6ZT83 130 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 MDP1Q86V88 176 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 PIGCQ92535 297 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 GALMQ96C23 342 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 BORCS8Q96FH0 119 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 DKK4Q9UBT3 224 aa6.32□□□□□ -1.4
HDAC9-218ENST00000456174 INTS1Q8N201 2190 aaKnown RBP6.31□□□□□ -1.4
HDAC9-218ENST00000456174 IGKV1-27A0A075B6S5 117 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 A0A0G2JLM5 398 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 OR4C46A6NHA9 309 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 ZNF850A8MQ14 1090 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 TNFSF12O43508 249 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 LYZL6O75951 148 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 CLDN1O95832 211 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 NAPSAO96009 420 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 HBZP02008 142 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 SLC25A6P12236 298 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 NTF3P20783 257 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 FXYD4P59646 89 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 RPL24P83731 157 aaKnown RBP6.31□□□□□ -1.4
HDAC9-218ENST00000456174 MEF2CQ06413 473 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-218ENST00000456174 FOXF2Q12947 444 aa6.31□□□□□ -1.4
HDAC9-218ENST00000456174 RPEL1Q2QD12 228 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms