RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 CD7P09564 240 aa12.86□□□□□ -0.35
TNFRSF4-202ENST00000453580 ERHP84090 104 aaKnown RBP12.86□□□□□ -0.35
TNFRSF4-202ENST00000453580 RELQ04864 619 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF4-202ENST00000453580 LINC00322Q6ZN03 302 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF4-202ENST00000453580 TMEM190Q8WZ59 177 aa12.86□□□□□ -0.35
TNFRSF4-202ENST00000453580 SEC22AQ96IW7 307 aa12.86□□□□□ -0.35
TNFRSF4-202ENST00000453580 TXN2Q99757 166 aa12.86□□□□□ -0.35
TNFRSF4-202ENST00000453580 MTFP1Q9UDX5 166 aa12.86□□□□□ -0.35
TNFRSF4-202ENST00000453580 NSG2Q9Y328 171 aa12.86□□□□□ -0.35
TNFRSF4-202ENST00000453580 OR2T8A6NH00 312 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 K7EMT4 169 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 TAS2R19P59542 299 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 HSPE1P61604 102 aaKnown RBP12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 TM4SF20Q53R12 229 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 Q56UQ5 140 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 BTNL8Q6UX41 500 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 DEFB125Q8N687 156 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 SCARB1Q8WTV0 552 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 CACNG8Q8WXS5 425 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 SPAG8Q99932 426 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 PDCD10Q9BUL8 212 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 EDA2RQ9HAV5 297 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 MLXQ9UH92 298 aa12.85□□□□□ -0.35
TNFRSF4-202ENST00000453580 M0QYG6 137 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 RGS5O15539 181 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 UNQ9165/PRO28630Q6UXU0 137 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 OR2C3Q8N628 320 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 TMEM229BQ8NBD8 167 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 ZNF114Q8NC26 417 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 TERB2Q8NHR7 220 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 COPZ2Q9P299 210 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 KLK11Q9UBX7 282 aa12.84□□□□□ -0.35
TNFRSF4-202ENST00000453580 GABARAPH6UMI1 98 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 SMIM18P0DKX4 95 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 FCGR2BP31994 310 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 AKR1C2P52895 323 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 SUB1P53999 127 aaKnown RBP eCLIP12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 MFAP4P55083 255 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 PIGPP57054 158 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 MEF2DQ14814 521 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 LHFPL1Q86WI0 220 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 UBAC2Q8NBM4 344 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 MRGPRFQ96AM1 343 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 BCL7BQ9BQE9 202 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 HIPK2Q9H2X6 1198 aa12.83□□□□□ -0.36
TNFRSF4-202ENST00000453580 C3orf85A0A1B0GTC6 90 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 C15orf62A8K5M9 175 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 CORTO00230 105 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 TSPAN4O14817 238 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 SCGB2A1O75556 95 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 SCAF4O95104 1147 aaKnown RBP12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 RAB3DO95716 219 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 CD3DP04234 171 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 CD5P06127 495 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 BMI1P35226 326 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 SNCAP37840 140 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 CMC4P56277 68 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 C20orf24Q9BUV8 137 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 GGTLC1Q9BX51 225 aa12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 NAA50Q9GZZ1 169 aaKnown RBP12.82□□□□□ -0.36
TNFRSF4-202ENST00000453580 LOC102724200A0A096LPH7 203 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 IGHV3-35A0A0C4DH35 117 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 OR4C46A6NHA9 309 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 K7EIM0 57 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 CD74P04233 296 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 EDN2P20800 178 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 MFAP2P55001 183 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 TRIM16LQ309B1 348 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 RNASE12Q5GAN4 147 aaKnown RBP12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 SLC35G3Q8N808 338 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 RAB2BQ8WUD1 216 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 RRNAD1Q96FB5 475 aaKnown RBP12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 MISP3Q96FF7 219 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 ABHD1Q96SE0 405 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 ENY2Q9NPA8 101 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 CACFD1Q9UGQ2 172 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 C14orf166Q9Y224 244 aaKnown RBP12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 NBEAL2Q6ZNJ1 2754 aa12.81□□□□□ -0.36
TNFRSF4-202ENST00000453580 RBMY1BA6NDE4 496 aaKnown RBP12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 RBMY1EA6NEQ0 496 aaKnown RBP12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 DISC1C4P0D8 188 aa12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 INS-IGF2F8WCM5 200 aa12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 NOL3O60936 208 aaKnown RBP12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 IGKV1-39P01597 117 aa12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 IGKV1D-39P04432 117 aa12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 RBMY1DP0C7P1 496 aaKnown RBP12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 NPBWR1P48145 328 aa12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 SURF2Q15527 256 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 SCGB2B2Q4G0G5 96 aa12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 STEAP1BQ6NZ63 245 aa12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 FAM219AQ8IW50 185 aa12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 RNASE11Q8TAA1 199 aaKnown RBP12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 FAM110AQ9BQ89 295 aa12.8□□□□□ -0.36
TNFRSF4-202ENST00000453580 DBX1A6NMT0 343 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 GNG7O60262 68 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 IFNA17P01571 189 aa12.79□□□□□ -0.36
TNFRSF4-202ENST00000453580 CTSDP07339 412 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms