RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 LY86O95711 162 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 TSPAN15O95858 294 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 IFNA21P01568 189 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 IL5P05113 134 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 CD28P10747 220 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 ANXA7P20073 488 aaKnown RBP6.8□□□□□ -1.32
COL28A1-205ENST00000453441 PSMB6P28072 239 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 RAB9AP51151 201 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 KRTAP10-3P60369 221 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 PRCDQ00LT1 54 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 DCTN2Q13561 401 aaKnown RBP6.8□□□□□ -1.32
COL28A1-205ENST00000453441 SMCO1Q147U7 214 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 PDLIM3Q53GG5 364 aaPredicted RBP6.8□□□□□ -1.32
COL28A1-205ENST00000453441 NMSQ5H8A3 153 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 C10orf55Q5SWW7 151 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 FAM223AQ8IWN6 122 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 LHFPL5Q8TAF8 219 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 MITD1Q8WV92 249 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 CITED2Q99967 270 aaPredicted RBP6.8□□□□□ -1.32
COL28A1-205ENST00000453441 PLEKHA3Q9HB20 300 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 THYN1Q9P016 225 aa6.8□□□□□ -1.32
COL28A1-205ENST00000453441 TRAV6A0A075B6T7 132 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 A0A0B4J293 547 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 IGLC7A0M8Q6 106 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 FAM90A26D6RGX4 464 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 SOX15O60248 233 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 IFNA17P01571 189 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 CTRB1P17538 263 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 ATP5IP56385 69 aaPredicted RBP6.79□□□□□ -1.32
COL28A1-205ENST00000453441 SPCS3P61009 180 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 ERHP84090 104 aaKnown RBP6.79□□□□□ -1.32
COL28A1-205ENST00000453441 RUNX1Q01196 453 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 ANKRD55Q3KP44 614 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 TCTEX1D4Q5JR98 221 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 KHDC1LQ5JSQ8 128 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 ASPHD1Q5U4P2 390 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 CTRB2Q6GPI1 263 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 NRARPQ7Z6K4 114 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 ZNF114Q8NC26 417 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 NECAP1Q8NC96 275 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 ZNF431Q8TF32 576 aaPredicted RBP6.79□□□□□ -1.32
COL28A1-205ENST00000453441 CASTOR1Q8WTX7 329 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 C4orf3Q8WVX3 66 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 MARVELD1Q9BSK0 173 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 ENY2Q9NPA8 101 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 ZNF355PQ9NSJ1 428 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 CACNG5Q9UF02 275 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 FLVCR2Q9UPI3 526 aa6.79□□□□□ -1.32
COL28A1-205ENST00000453441 TRBV9A0A0B4J1U6 114 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 C13orf42A0A1B0GVH6 325 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 CGB1A6NKQ9 187 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 SNRPGP15A8MWD9 76 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 NUDT19A8MXV4 375 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 INMT-MINDY4F8WBC2 141 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 CORTO00230 105 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 ST8SIA3O43173 380 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 MED6O75586 246 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 TRGV3P03979 118 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 OR13C7P0DN81 318 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 DEFA4P12838 97 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 SUB1P53999 127 aaKnown RBP eCLIP6.78□□□□□ -1.32
COL28A1-205ENST00000453441 TPPP2P59282 170 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 ZNF124Q15973 351 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 PRR31Q5SQ13 230 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 C10orf99Q6UWK7 81 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 LYZL2Q7Z4W2 148 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 NOXA1Q86UR1 476 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 ZNF491Q8N8L2 437 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 C11orf44Q8N8P7 122 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 OR5T1Q8NG75 326 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 OR1S1Q8NH92 325 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 GPR146Q96CH1 333 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 CXorf58Q96LI9 332 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 ATP6V0BQ99437 205 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 HINT2Q9BX68 163 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 NSG2Q9Y328 171 aa6.78□□□□□ -1.32
COL28A1-205ENST00000453441 A0A0G2JRQ6 117 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 A0A1B0GW64 132 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 HMX3A6NHT5 357 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 E7EUB6 86 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 LGALS1P09382 135 aaKnown RBP6.77□□□□□ -1.33
COL28A1-205ENST00000453441 AREGP15514 252 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 SNCAP37840 140 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 MYCNOSP40205 109 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 HOXA1P49639 335 aaPredicted RBP6.77□□□□□ -1.33
COL28A1-205ENST00000453441 ATP5G2Q06055 141 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 WT1-ASQ06250 92 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 SRSF4Q08170 494 aaKnown RBP6.77□□□□□ -1.33
COL28A1-205ENST00000453441 RGS21Q2M5E4 152 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 C12orf45Q8N5I9 185 aaPredicted RBP6.77□□□□□ -1.33
COL28A1-205ENST00000453441 OR2C3Q8N628 320 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 KLHL30-AS1Q8NEE0 82 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 OR1P1Q8NH06 330 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 CIB3Q96Q77 187 aaPredicted RBP6.77□□□□□ -1.33
COL28A1-205ENST00000453441 HIPK2Q9H2X6 1198 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 GAR1Q9NY12 217 aaKnown RBP6.77□□□□□ -1.33
COL28A1-205ENST00000453441 HSPB7Q9UBY9 170 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 F11RQ9Y624 299 aaKnown RBP6.77□□□□□ -1.33
COL28A1-205ENST00000453441 WNK1Q9H4A3 2382 aa6.77□□□□□ -1.33
COL28A1-205ENST00000453441 IGLV11-55A0A075B6I3 123 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms