RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 NKX2-1P43699 371 aaPredicted RBP9.05□□□□□ -0.96
SCN9A-204ENST00000452182 ERHP84090 104 aaKnown RBP9.05□□□□□ -0.96
SCN9A-204ENST00000452182 IL15RAQ13261 267 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 CXorf66Q5JRM2 361 aaPredicted RBP9.05□□□□□ -0.96
SCN9A-204ENST00000452182 ZNF329Q86UD4 541 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 ZNF114Q8NC26 417 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 OR5AU1Q8NGC0 362 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 WFDC12Q8WWY7 111 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 MED28Q9H204 178 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 ENY2Q9NPA8 101 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 CEBPZOSA8MTT3 80 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 HOXA1P49639 335 aaPredicted RBP9.05□□□□□ -0.96
SCN9A-204ENST00000452182 H2BFSP57053 126 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 RRAS2P62070 204 aaPredicted RBP9.05□□□□□ -0.96
SCN9A-204ENST00000452182 CYCSP99999 105 aaKnown RBP9.05□□□□□ -0.96
SCN9A-204ENST00000452182 SRSF4Q08170 494 aaKnown RBP9.05□□□□□ -0.96
SCN9A-204ENST00000452182 C10orf99Q6UWK7 81 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 OR5T1Q8NG75 326 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 OR4X2Q8NGF9 303 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 OR1L6Q8NGR2 347 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 NMES1Q9C002 83 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 RBKSQ9H477 322 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 SLA2Q9H6Q3 261 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 MGAT4CQ9UBM8 478 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 TMEM238LA0A1B0GVL6 79 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 SYNGR2O43760 224 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 HIST1H1BP16401 226 aaKnown RBP9.04□□□□□ -0.96
SCN9A-204ENST00000452182 ATP5IP56385 69 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-204ENST00000452182 BSXQ3C1V8 233 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 SPINK9Q5DT21 86 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 OR1P1Q8NH06 330 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 MYOZ3Q8TDC0 251 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 DTD1Q8TEA8 209 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 CIB3Q96Q77 187 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-204ENST00000452182 HIPK2Q9H2X6 1198 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 ZFP57Q9NU63 452 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 GSKIPQ9P0R6 139 aa9.04□□□□□ -0.96
SCN9A-204ENST00000452182 F11RQ9Y624 299 aaKnown RBP9.04□□□□□ -0.96
SCN9A-204ENST00000452182 TRBV9A0A0B4J1U6 114 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 CYB5BO43169 146 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 NXPH3O95157 252 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 MBPP02686 304 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-204ENST00000452182 REG1AP05451 166 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 CXCL3P19876 107 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 SNCAP37840 140 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 HTR2BP41595 481 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 RAB9AP51151 201 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 CD83Q01151 205 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 FCN2Q15485 313 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 TCTEX1D4Q5JR98 221 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 PVRIGQ6DKI7 326 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 TMEM65Q6PI78 240 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 OR11H7Q8NGC8 314 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 ASB13Q8WXK3 278 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 FANCD2OSQ96PS1 177 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 P2RX4Q99571 388 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 HEYLQ9NQ87 328 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-204ENST00000452182 U3KQ87 197 aa9.03□□□□□ -0.96
SCN9A-204ENST00000452182 IGLV11-55A0A075B6I3 123 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 WRBO00258 174 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 SIX6O95475 246 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 GHRHP01286 108 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 PF4V1P10720 104 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 DEFA4P12838 97 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 SUB1P53999 127 aaKnown RBP eCLIP9.02□□□□□ -0.96
SCN9A-204ENST00000452182 KRTAP10-3P60369 221 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 POLR2GP62487 172 aaKnown RBP eCLIP9.02□□□□□ -0.96
SCN9A-204ENST00000452182 NECAP1Q8NC96 275 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 RAB40CQ96S21 281 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 MDFIQ99750 246 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 CITED1Q99966 193 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 ZNF747Q9BV97 191 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 MAGT1Q9H0U3 335 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 KLK15Q9H2R5 256 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 THYN1Q9P016 225 aa9.02□□□□□ -0.96
SCN9A-204ENST00000452182 FAM223BA6NKX1 122 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 RNASE2P10153 161 aaKnown RBP9.02□□□□□ -0.97
SCN9A-204ENST00000452182 CD28P10747 220 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 TAS2R30P59541 319 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 KIAA0141Q14154 515 aaPredicted RBP9.02□□□□□ -0.97
SCN9A-204ENST00000452182 C2orf83Q53S99 150 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 C12orf54Q6X4T0 127 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 NOXA1Q86UR1 476 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 FAM223AQ8IWN6 122 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 SLC24A4Q8NFF2 622 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 USMG5Q96IX5 58 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 SMIM8Q96KF7 97 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 UBE2E2Q96LR5 201 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 ZNF355PQ9NSJ1 428 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 RCL1Q9Y2P8 373 aaKnown RBP9.02□□□□□ -0.97
SCN9A-204ENST00000452182 DMRT1Q9Y5R6 373 aa9.02□□□□□ -0.97
SCN9A-204ENST00000452182 TENM1Q9UKZ4 2725 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 A0A0G2JLM5 398 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 K7EPK0 472 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 CORTO00230 105 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 SCGB1D2O95969 90 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 PRH1P02810 166 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 TRGV3P03979 118 aa9.01□□□□□ -0.97
SCN9A-204ENST00000452182 CDX1P47902 265 aaPredicted RBP9.01□□□□□ -0.97
SCN9A-204ENST00000452182 MFAP2P55001 183 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms