RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 GLRX5Q86SX6 157 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 ZCCHC24Q8N2G6 241 aaKnown RBP8.7□□□□□ -1.02
CTC1-202ENST00000449476 CACNG8Q8WXS5 425 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 DPM3Q9P2X0 92 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 ABCA4P78363 2273 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 A6NDN8 102 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 NAPSAO96009 420 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 RNF224P0DH78 156 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 ID1P41134 155 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 NMUP48645 174 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 MIR17HGQ75NE6 70 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 TMEM144Q7Z5S9 345 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 IL36BQ9NZH7 164 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 HERVK_113P61574 105 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 ZNF841Q6ZN19 808 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 BMPERQ8N8U9 685 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 IGHV1-18A0A0C4DH31 117 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 CD5P06127 495 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 DUTP33316 252 aaKnown RBP8.7□□□□□ -1.02
CTC1-202ENST00000449476 TFPI2P48307 235 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 RPL24P83731 157 aaKnown RBP8.7□□□□□ -1.02
CTC1-202ENST00000449476 TMEM42Q69YG0 159 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 ZNF738Q8NE65 137 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 OR10J6PQ8NGY7 276 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 UQCR10Q9UDW1 63 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 ANAPC1Q9H1A4 1944 aa8.7□□□□□ -1.02
CTC1-202ENST00000449476 SAA1P0DJI8 122 aaPredicted RBP8.69□□□□□ -1.02
CTC1-202ENST00000449476 FOXF2Q12947 444 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 VOPP1Q96AW1 172 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 IMMP2LQ96T52 175 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 NOTCH3Q9UM47 2321 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 A0A1W2PS18 150 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 RBFOX2O43251 390 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTC1-202ENST00000449476 IL18BPO95998 194 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 HOXA5P20719 270 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 HINT1P49773 126 aaPredicted RBP8.69□□□□□ -1.02
CTC1-202ENST00000449476 FOXA3P55318 350 aaPredicted RBP8.69□□□□□ -1.02
CTC1-202ENST00000449476 PSG9Q00887 426 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTC1-202ENST00000449476 SRSF7Q16629 238 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTC1-202ENST00000449476 C5orf24Q7Z6I8 188 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 CBLN4Q9NTU7 201 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 MED13LQ71F56 2210 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 UPK2O00526 184 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 PSPNO60542 156 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 BTF3P20290 206 aaKnown RBP8.69□□□□□ -1.02
CTC1-202ENST00000449476 REG4Q9BYZ8 158 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 C15orf61A6NNL5 157 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 C1QTNF9BB2RNN3 333 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 GFRA3O60609 400 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 FOLR2P14207 255 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 KLRB1Q12918 225 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 ZNF581Q9P0T4 197 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 S4R3C0 116 aa8.69□□□□□ -1.02
CTC1-202ENST00000449476 RPL13AP40429 203 aaKnown RBP8.68□□□□□ -1.02
CTC1-202ENST00000449476 TM4SF20Q53R12 229 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 WDR83OSQ9Y284 106 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 USF3Q68DE3 2245 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 PEX7O00628 323 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 B3GALT5-AS1P59052 145 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 RELQ04864 619 aaPredicted RBP8.68□□□□□ -1.02
CTC1-202ENST00000449476 ATOH7Q8N100 152 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 OR52E5Q8NH55 327 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 RNASEH2CQ8TDP1 164 aaKnown RBP8.68□□□□□ -1.02
CTC1-202ENST00000449476 IGHV3OR16-13A0A075B7E8 117 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 IGHV3-74A0A0B4J1X5 117 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 SOD3P08294 240 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 OR9G9P0C7N8 305 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 RPS20P60866 119 aaKnown RBP8.68□□□□□ -1.02
CTC1-202ENST00000449476 HBBP68871 147 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 NMSQ5H8A3 153 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 VSIRQ9H7M9 311 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 ANOS1P23352 680 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 C2orf83Q53S99 150 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 LYRM7Q5U5X0 104 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 MBD3L1Q8WWY6 194 aa8.68□□□□□ -1.02
CTC1-202ENST00000449476 HELZP42694 1942 aaKnown RBP8.67□□□□□ -1.02
CTC1-202ENST00000449476 OR4C46A6NHA9 309 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 SRRM5B3KS81 715 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 DYNLRB2Q8TF09 96 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 ATXN7O15265 892 aaPredicted RBP8.67□□□□□ -1.02
CTC1-202ENST00000449476 WISP1O95388 367 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 C1QTNF9P0C862 333 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 NPPCP23582 126 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 RAB9AP51151 201 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 CX3CL1P78423 397 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 LY6EQ16553 131 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 TBR1Q16650 682 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 COL25A1Q9BXS0 654 aaPredicted RBP8.67□□□□□ -1.02
CTC1-202ENST00000449476 GCSAMLQ5JQS6 135 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 GSN-AS1Q9NRJ2 163 aa8.67□□□□□ -1.02
CTC1-202ENST00000449476 FOXA2Q9Y261 457 aaPredicted RBP8.67□□□□□ -1.02
CTC1-202ENST00000449476 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.67□□□□□ -1.022e-9■■■■■ 27.1
CTC1-202ENST00000449476 TCF21O43680 179 aa8.66□□□□□ -1.02
CTC1-202ENST00000449476 LILRA1O75019 489 aa8.66□□□□□ -1.02
CTC1-202ENST00000449476 IGKV1D-33P01593 117 aa8.66□□□□□ -1.02
CTC1-202ENST00000449476 IGKV1-33P01594 117 aa8.66□□□□□ -1.02
CTC1-202ENST00000449476 SELLP14151 372 aa8.66□□□□□ -1.02
CTC1-202ENST00000449476 HGFACQ04756 655 aa8.66□□□□□ -1.02
CTC1-202ENST00000449476 SRSF4Q08170 494 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms