RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 GZMBP10144 247 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 NPY1RP25929 384 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 CHRNA7P36544 502 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 PSMB3P49720 205 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 VWC2Q2TAL6 325 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 SLC25A48Q6ZT89 311 aaKnown RBP12.06□□□□□ -0.48
SF1-211ENST00000448404 C16orf82Q7Z2V1 217 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 CENPVQ7Z7K6 275 aaPredicted RBP12.06□□□□□ -0.48
SF1-211ENST00000448404 CSMD2Q7Z408 3487 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 J3QR06 171 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 TNFRSF1AP19438 455 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 SSBP2P81877 361 aaPredicted RBP12.05□□□□□ -0.48
SF1-211ENST00000448404 ATP6V1FQ16864 119 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 SMDT1Q9H4I9 107 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 A0A1W2PPV4 95 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 hADV38S2A0JD32 116 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 NDUFB4O95168 129 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 PRB4P10163 310 aaPredicted RBP12.05□□□□□ -0.48
SF1-211ENST00000448404 RAB7AP51149 207 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
SF1-211ENST00000448404 RPL23P62829 140 aaKnown RBP12.05□□□□□ -0.48
SF1-211ENST00000448404 RELQ04864 619 aaPredicted RBP12.05□□□□□ -0.48
SF1-211ENST00000448404 TEX36Q5VZQ5 186 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 ZNF714Q96N38 554 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 TIMM9Q9Y5J7 89 aa12.05□□□□□ -0.48
SF1-211ENST00000448404 IGHV3-21A0A0B4J1V1 117 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 RUSC1-AS1Q66K80 236 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 TCTEX1D1Q8N7M0 179 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 HARBI1Q96MB7 349 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 TMEM14BQ9NUH8 114 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 A0A0U1RQK1 487 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 RAB4BP61018 213 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 GNB1P62873 340 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 STPG3Q8N7X2 389 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 OR9G1Q8NH87 305 aa12.04□□□□□ -0.48
SF1-211ENST00000448404 A0A087WWC5 75 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 TEX50A0A1B0GTY4 177 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 NKX6-3A6NJ46 265 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 IL6RP08887 468 aaPredicted RBP12.03□□□□□ -0.48
SF1-211ENST00000448404 PAX1P15863 534 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 THBS3P49746 956 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 OR10X1Q8NGY0 326 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 OR5R1Q8NH85 324 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 OR2T6Q8NHC8 308 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 JKAMPQ9P055 326 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 RBFOX2O43251 390 aaKnown RBP eCLIP12.03□□□□□ -0.489e-11■■■■■ 27.3
SF1-211ENST00000448404 C1QTNF9P0C862 333 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 CNTFRP26992 372 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 FAM3BP58499 235 aaPredicted RBP12.03□□□□□ -0.48
SF1-211ENST00000448404 JOSD1Q15040 202 aaPredicted RBP12.03□□□□□ -0.48
SF1-211ENST00000448404 TMEM241Q24JQ0 296 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 ACOT6Q3I5F7 207 aaPredicted RBP12.03□□□□□ -0.48
SF1-211ENST00000448404 PARD6GQ9BYG4 376 aaPredicted RBP12.03□□□□□ -0.48
SF1-211ENST00000448404 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
SF1-211ENST00000448404 TRBV20OR9-2A0A075B6H5 130 aa12.02□□□□□ -0.48
SF1-211ENST00000448404 SCO2A0A1W2PP80 73 aa12.02□□□□□ -0.48
SF1-211ENST00000448404 ENSAO43768 121 aaKnown RBP12.02□□□□□ -0.48
SF1-211ENST00000448404 IFNA1P01562 189 aa12.02□□□□□ -0.48
SF1-211ENST00000448404 LOXP28300 417 aaPredicted RBP12.02□□□□□ -0.48
SF1-211ENST00000448404 MIR17HGQ75NE6 70 aa12.02□□□□□ -0.48
SF1-211ENST00000448404 ENY2Q9NPA8 101 aa12.02□□□□□ -0.48
SF1-211ENST00000448404 GAB2Q9UQC2 676 aa12.02□□□□□ -0.48
SF1-211ENST00000448404 YTHDF2Q9Y5A9 579 aaKnown RBP12.02□□□□□ -0.48
SF1-211ENST00000448404 LINC00312Q9Y6C7 94 aa12.02□□□□□ -0.48
SF1-211ENST00000448404 CRYBG3Q68DQ2 2970 aa12.02□□□□□ -0.48
SF1-211ENST00000448404 A0A1W2PPQ1 181 aa12.02□□□□□ -0.49
SF1-211ENST00000448404 C17orf112F2Z3M2 114 aa12.02□□□□□ -0.49
SF1-211ENST00000448404 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.49
SF1-211ENST00000448404 BSXQ3C1V8 233 aa12.02□□□□□ -0.49
SF1-211ENST00000448404 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
SF1-211ENST00000448404 ACY3Q96HD9 319 aa12.02□□□□□ -0.49
SF1-211ENST00000448404 ELOVL5Q9NYP7 299 aa12.02□□□□□ -0.49
SF1-211ENST00000448404 KBTBD11O94819 623 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 OR10J4P0C629 311 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 C3orf36Q3SXR2 165 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 OR4P4Q8NGL7 312 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 PLEKHA3Q9HB20 300 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 SIRT7Q9NRC8 400 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 UPK2O00526 184 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 NDUFB3O43676 98 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 AMBPP02760 352 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 AARDQ4LEZ3 155 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 MORN5Q5VZ52 161 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 C1orf87Q8N0U7 546 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 FOXA2Q9Y261 457 aaPredicted RBP12.01□□□□□ -0.49
SF1-211ENST00000448404 A0A1W2PRD5 423 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 A0A1W2PRF3 423 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 A0A1W2PRM7 423 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 H0YJW9 148 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 CLDN34H7C241 214 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 SLC25A17O43808 307 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 COX7A1P24310 79 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 EFNB3Q15768 340 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 NOL4LQ96MY1 436 aaPredicted RBP12.01□□□□□ -0.49
SF1-211ENST00000448404 PCGF1Q9BSM1 259 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 SNHG12Q9BXW3 62 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
SF1-211ENST00000448404 NAT8Q9UHE5 227 aa12.01□□□□□ -0.49
SF1-211ENST00000448404 LSM4Q9Y4Z0 139 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms