RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 HEYLQ9NQ87 328 aaPredicted RBP13.47□□□□□ -0.25
LIME1-202ENST00000444951 HSPB7Q9UBY9 170 aa13.47□□□□□ -0.25
LIME1-202ENST00000444951 PF4V1P10720 104 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 DEFA4P12838 97 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 PSMB6P28072 239 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 H2BFSP57053 126 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 S100A10P60903 97 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 POLR2GP62487 172 aaKnown RBP eCLIP13.46□□□□□ -0.25
LIME1-202ENST00000444951 AARDQ4LEZ3 155 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 MRPL41Q8IXM3 137 aaKnown RBP13.46□□□□□ -0.25
LIME1-202ENST00000444951 OR11H7Q8NGC8 314 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 DTD1Q8TEA8 209 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 WNT10AQ9GZT5 417 aa13.46□□□□□ -0.25
LIME1-202ENST00000444951 LSM5Q9Y4Y9 91 aaKnown RBP13.46□□□□□ -0.25
LIME1-202ENST00000444951 SSSCA1O60232 199 aa13.45□□□□□ -0.26
LIME1-202ENST00000444951 SOX15O60248 233 aa13.45□□□□□ -0.26
LIME1-202ENST00000444951 ERHP84090 104 aaKnown RBP13.45□□□□□ -0.26
LIME1-202ENST00000444951 DEFA5Q01523 94 aa13.45□□□□□ -0.26
LIME1-202ENST00000444951 CFHR3Q02985 330 aa13.45□□□□□ -0.26
LIME1-202ENST00000444951 FAM110DQ8TAY7 271 aaPredicted RBP13.45□□□□□ -0.26
LIME1-202ENST00000444951 TMEM68Q96MH6 324 aa13.45□□□□□ -0.26
LIME1-202ENST00000444951 FAM90A26D6RGX4 464 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 M0QZ24 198 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 SYNGR2O43760 224 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 FBXO24O75426 580 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 MED6O75586 246 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 MBPP02686 304 aaPredicted RBP13.44□□□□□ -0.26
LIME1-202ENST00000444951 PPIFP30405 207 aaKnown RBP13.44□□□□□ -0.26
LIME1-202ENST00000444951 SNCAP37840 140 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 ID3Q02535 119 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 LRRC37A5PQ49AS3 106 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 KHDC1LQ5JSQ8 128 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 TMEM65Q6PI78 240 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 HSD17B13Q7Z5P4 300 aaPredicted RBP13.44□□□□□ -0.26
LIME1-202ENST00000444951 TTC9CQ8N5M4 171 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 SRSF8Q9BRL6 282 aaKnown RBP13.44□□□□□ -0.26
LIME1-202ENST00000444951 HIPK2Q9H2X6 1198 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 CACFD1Q9UGQ2 172 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 ZNF580Q9UK33 172 aa13.44□□□□□ -0.26
LIME1-202ENST00000444951 RCL1Q9Y2P8 373 aaKnown RBP13.44□□□□□ -0.26
LIME1-202ENST00000444951 A0A1B0GVG6 124 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 NPIPB5A8MRT5 1133 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 TRGV3P03979 118 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 CD28P10747 220 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 CTRB1P17538 263 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 RAB32Q13637 225 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 CTRB2Q6GPI1 263 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 SLC25A24Q6NUK1 477 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 TEX38Q6PEX7 206 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 C1QL4Q86Z23 238 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 OR2C3Q8N628 320 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 OR4X2Q8NGF9 303 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 KLK15Q9H2R5 256 aa13.43□□□□□ -0.26
LIME1-202ENST00000444951 PAIP2BQ9ULR5 123 aaKnown RBP13.43□□□□□ -0.26
LIME1-202ENST00000444951 K7EPK0 472 aa13.42□□□□□ -0.26
LIME1-202ENST00000444951 IFNA10P01566 189 aa13.42□□□□□ -0.26
LIME1-202ENST00000444951 IGLV1-40P01703 118 aa13.42□□□□□ -0.26
LIME1-202ENST00000444951 IGHG4P01861 327 aa13.42□□□□□ -0.26
LIME1-202ENST00000444951 TPPP2P59282 170 aa13.42□□□□□ -0.26
LIME1-202ENST00000444951 CYCSP99999 105 aaKnown RBP13.42□□□□□ -0.26
LIME1-202ENST00000444951 P2RX4Q99571 388 aa13.42□□□□□ -0.26
LIME1-202ENST00000444951 NMES1Q9C002 83 aa13.42□□□□□ -0.26
LIME1-202ENST00000444951 ZNF436Q9C0F3 470 aaPredicted RBP13.42□□□□□ -0.26
LIME1-202ENST00000444951 H3BP45 60 aa13.41□□□□□ -0.26
LIME1-202ENST00000444951 L7N2F9 121 aa13.41□□□□□ -0.26
LIME1-202ENST00000444951 OR2J3O76001 311 aa13.41□□□□□ -0.26
LIME1-202ENST00000444951 RPLP1P05386 114 aaKnown RBP13.41□□□□□ -0.26
LIME1-202ENST00000444951 CRYGCP07315 174 aa13.41□□□□□ -0.26
LIME1-202ENST00000444951 VAMP2P63027 116 aa13.41□□□□□ -0.26
LIME1-202ENST00000444951 FOXE3Q13461 319 aa13.41□□□□□ -0.26
LIME1-202ENST00000444951 MISP3Q96FF7 219 aa13.41□□□□□ -0.26
LIME1-202ENST00000444951 F11RQ9Y624 299 aaKnown RBP13.41□□□□□ -0.26
LIME1-202ENST00000444951 IGHV3-21A0A0B4J1V1 117 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 TCRBV4S1A1TA0A5B7 111 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 ELANEP08246 267 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 RNASE2P10153 161 aaKnown RBP13.4□□□□□ -0.26
LIME1-202ENST00000444951 RAB9AP51151 201 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 SUB1P53999 127 aaKnown RBP eCLIP13.4□□□□□ -0.26
LIME1-202ENST00000444951 MFAP2P55001 183 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 RHOGP84095 191 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 CD83Q01151 205 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 IL15RAQ13261 267 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 TCTEX1D4Q5JR98 221 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 COMMD1Q8N668 190 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 SLC24A4Q8NFF2 622 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 WIPF2Q8TF74 440 aaPredicted RBP13.4□□□□□ -0.26
LIME1-202ENST00000444951 PSENENQ9NZ42 101 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 FBXL7Q9UJT9 491 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 DMRT1Q9Y5R6 373 aa13.4□□□□□ -0.26
LIME1-202ENST00000444951 A0A1W2PRX2 142 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 INS-IGF2F8WCM5 200 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 NPY1RP25929 384 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 PSMB8P28062 276 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 HTR2BP41595 481 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 SPANXN5Q5MJ07 72 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 CHAC2Q8WUX2 184 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 PPP1R1CQ8WVI7 109 aa13.39□□□□□ -0.27
LIME1-202ENST00000444951 PINX1Q96BK5 328 aaKnown RBP13.39□□□□□ -0.27
LIME1-202ENST00000444951 FANCD2OSQ96PS1 177 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 324.3 ms