RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 DEFB1P60022 68 aa9.5□□□□□ -0.89
SYNCRIP-203ENST00000444272 RPL37AP61513 92 aaKnown RBP9.5□□□□□ -0.89
SYNCRIP-203ENST00000444272 SNRPD3P62318 126 aaKnown RBP9.5□□□□□ -0.89
SYNCRIP-203ENST00000444272 SYS1Q8N2H4 156 aa9.5□□□□□ -0.89
SYNCRIP-203ENST00000444272 TMEM208Q9BTX3 173 aa9.5□□□□□ -0.89
SYNCRIP-203ENST00000444272 COMMD5Q9GZQ3 224 aa9.5□□□□□ -0.89
SYNCRIP-203ENST00000444272 HRASLSQ9HDD0 168 aa9.5□□□□□ -0.89
SYNCRIP-203ENST00000444272 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
SYNCRIP-203ENST00000444272 ZNF705GA8MUZ8 300 aaPredicted RBP9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 EBAG9O00559 213 aa9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 ATP8B1O43520 1251 aa9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 NXPH4O95158 308 aa9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 IGLV2-8P01709 118 aa9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 OR4A4PQ8NGN8 299 aa9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 MRPL48Q96GC5 212 aaKnown RBP9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 QTRT1Q9BXR0 403 aaKnown RBP9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 C12orf4Q9NQ89 552 aa9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 BET1LQ9NYM9 111 aa9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 CKLFQ9UBR5 152 aa9.49□□□□□ -0.89
SYNCRIP-203ENST00000444272 M0QYG6 137 aa9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 FABP7O15540 132 aa9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 NPPCP23582 126 aa9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 GBX2P52951 348 aaPredicted RBP9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 MFAP4P55083 255 aa9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 TAS2R43P59537 309 aa9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 MRPL28Q13084 256 aaKnown RBP9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 TIMM50Q3ZCQ8 353 aa9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 KCTD21Q4G0X4 260 aa9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 RBM48Q5RL73 367 aaKnown RBP9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 TTC23Q5W5X9 447 aa9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 SLC25A46Q96AG3 418 aa9.48□□□□□ -0.89
SYNCRIP-203ENST00000444272 TRBV6-7A0A0A0MS04 114 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 FAM90A26D6RGX4 464 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 J3QRK9 145 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 GNG7O60262 68 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 HRASP01112 189 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 IGHV3-48P01763 117 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 RASSF2P50749 326 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 DHFR2Q86XF0 187 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 CADM3Q8N126 398 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 OR4B1Q8NGF8 309 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 CABLES2Q9BTV7 478 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 TMEM59Q9BXS4 323 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 DNAJC4Q9NNZ3 241 aa9.47□□□□□ -0.89
SYNCRIP-203ENST00000444272 A0A0A6YYD4 124 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 PLAC8L1A1L4L8 177 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 ZNF701M0R085 212 aaPredicted RBP9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 PSCAO43653 123 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 BRWD1-AS2P59051 145 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 PQLC1Q8N2U9 271 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 CIRBP-AS1Q8TBR5 109 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 TCTEX1D2Q8WW35 142 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 ATP6V1G3Q96LB4 118 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 GPHA2Q96T91 129 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 TXN2Q99757 166 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 CHAC1Q9BUX1 264 aa9.46□□□□□ -0.9
SYNCRIP-203ENST00000444272 TRAV9-2A0A087WT02 112 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 A0A1B0GU03 582 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 A0A1W2PPK0 400 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 DENRO43583 198 aaKnown RBP9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 EIF2B2P49770 351 aaKnown RBP9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 XAF1Q6GPH4 301 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 ZNF600Q6ZNG1 722 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 CDH26Q8IXH8 852 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 MOB3AQ96BX8 217 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 CMSS1Q9BQ75 279 aaKnown RBP9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 GINS4Q9BRT9 223 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 KCNK15Q9H427 330 aa9.45□□□□□ -0.9
SYNCRIP-203ENST00000444272 TRAPPC2P0DI81 140 aa9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 TRAPPC2BP0DI82 140 aa9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 HOXA5P20719 270 aa9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 THOC7Q6I9Y2 204 aaKnown RBP9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 Q6ZRU5 148 aa9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 HSD17B13Q7Z5P4 300 aaPredicted RBP9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 ADGRG5Q8IZF4 528 aa9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 DEFB107AQ8IZN7 70 aa9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 METTL26Q96S19 204 aa9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 MYCBPQ99417 103 aaPredicted RBP9.44□□□□□ -0.9
SYNCRIP-203ENST00000444272 A0A096LPF7 62 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 H3BNG1 76 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 I3L2K1 104 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 UPK2O00526 184 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 SOCS1O15524 211 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 CD36P16671 472 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 CRYBB3P26998 211 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 NKX2-1P43699 371 aaPredicted RBP9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 PPP5CP53041 499 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 PSG9Q00887 426 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 ACSM3Q53FZ2 586 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 MISP3Q96FF7 219 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 HINT2Q9BX68 163 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 SAV1Q9H4B6 383 aaPredicted RBP9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 RAB21Q9UL25 225 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 SPATA2Q9UM82 520 aa9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 RBMX2Q9Y388 322 aaKnown RBP9.43□□□□□ -0.9
SYNCRIP-203ENST00000444272 AZU1P20160 251 aa9.42□□□□□ -0.9
SYNCRIP-203ENST00000444272 PRDX6P30041 224 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms