RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 C15orf32Q32M92 178 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 SAMD5Q5TGI4 173 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 SLC35G3Q8N808 338 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 LHFPL5Q8TAF8 219 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 EEF1AKMT3Q96AZ1 226 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 FANCD2OSQ96PS1 177 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 ALX4Q9H161 411 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-211ENST00000443563 ENY2Q9NPA8 101 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 SHPKQ9UHJ6 478 aa8.37□□□□□ -1.07
HDAC6-211ENST00000443563 F11RQ9Y624 299 aaKnown RBP8.37□□□□□ -1.07
HDAC6-211ENST00000443563 TRBV7-1A0A0A6YYK4 115 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 A0A0B4J293 547 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 ANKRD34BA5PLL1 514 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 DBX1A6NMT0 343 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 INS-IGF2F8WCM5 200 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 G3V4G9 280 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 ST8SIA3O43173 380 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 SULT1A3P0DMM9 295 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 SULT1A4P0DMN0 295 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 INSL3P51460 131 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 SUB1P53999 127 aaKnown RBP eCLIP8.36□□□□□ -1.07
HDAC6-211ENST00000443563 IZUMO4Q1ZYL8 232 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 C9orf66Q5T8R8 295 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 SLC25A24Q6NUK1 477 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 MZT2BQ6NZ67 158 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 OR1P1Q8NH06 330 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 OR52E5Q8NH55 327 aa8.36□□□□□ -1.07
HDAC6-211ENST00000443563 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.35□□□□□ -1.07
HDAC6-211ENST00000443563 A0A0G2JRQ6 117 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 OVOL1O14753 267 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 PLA2G10O15496 165 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 NDUFB8O95169 186 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 SFT2D2O95562 160 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-211ENST00000443563 BTCP35070 178 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 SNCAP37840 140 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 SPCS3P61009 180 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 DEFA5Q01523 94 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 PPP1R1AQ13522 171 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 RPEL1Q2QD12 228 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 AARDQ4LEZ3 155 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 KPRPQ5T749 579 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-211ENST00000443563 OR2C3Q8N628 320 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 ZNF114Q8NC26 417 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 VN1R17PQ8TDU5 208 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 GPR146Q96CH1 333 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 ELOVL1Q9BW60 279 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 CACNG5Q9UF02 275 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 TMED3Q9Y3Q3 217 aa8.35□□□□□ -1.07
HDAC6-211ENST00000443563 NOTCH1P46531 2555 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 A0A1B0GU03 582 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 FAM240BA0A1B0GVZ2 78 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 SEC14L6B5MCN3 397 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 UPK1BO75841 260 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 HLA-AP01891 365 aaKnown RBP8.34□□□□□ -1.07
HDAC6-211ENST00000443563 OR4E1P0C645 316 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 HOXA1P49639 335 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-211ENST00000443563 SLURP1P55000 103 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 SMCO1Q147U7 214 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 BEAN1Q3B7T3 259 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 PDLIM3Q53GG5 364 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-211ENST00000443563 NMSQ5H8A3 153 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 Q6ZRM9 215 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 C19orf35Q6ZS72 473 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 LYZL2Q7Z4W2 148 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 COQ8AQ8NI60 647 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 DCUN1D4Q92564 292 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 DLX4Q92988 240 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-211ENST00000443563 ATP6V0BQ99437 205 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 C20orf85Q9H1P6 137 aa8.34□□□□□ -1.07
HDAC6-211ENST00000443563 C9orf170A2RU37 121 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 CORTO00230 105 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 WIPF1O43516 503 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 GGCTO75223 188 aaKnown RBP8.33□□□□□ -1.08
HDAC6-211ENST00000443563 TCRBP04435 133 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 SLC25A6P12236 298 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 DEFA6Q01524 100 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 ASAH1Q13510 395 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 KLF5Q13887 457 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-211ENST00000443563 C4orf46Q504U0 113 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 REC114Q7Z4M0 266 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 LYG2Q86SG7 212 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 C1QL4Q86Z23 238 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 OR1S1Q8NH92 325 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 HIPK2Q9H2X6 1198 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 HEYLQ9NQ87 328 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-211ENST00000443563 GAR1Q9NY12 217 aaKnown RBP8.33□□□□□ -1.08
HDAC6-211ENST00000443563 PRR13Q9NZ81 148 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 FLVCR2Q9UPI3 526 aa8.33□□□□□ -1.08
HDAC6-211ENST00000443563 MFSD2BA6NFX1 497 aa8.32□□□□□ -1.08
HDAC6-211ENST00000443563 CEBPZOSA8MTT3 80 aa8.32□□□□□ -1.08
HDAC6-211ENST00000443563 BMPR1BO00238 502 aa8.32□□□□□ -1.08
HDAC6-211ENST00000443563 IFNA21P01568 189 aa8.32□□□□□ -1.08
HDAC6-211ENST00000443563 ARL3P36405 182 aa8.32□□□□□ -1.08
HDAC6-211ENST00000443563 HTR2BP41595 481 aa8.32□□□□□ -1.08
HDAC6-211ENST00000443563 DEFA1P59665 94 aa8.32□□□□□ -1.08
HDAC6-211ENST00000443563 DEFA3P59666 94 aa8.32□□□□□ -1.08
HDAC6-211ENST00000443563 DHRS2Q13268 280 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms