RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 CXorf1O96002 111 aa11.65□□□□□ -0.55
MCF2L-218ENST00000442625 CA1P00915 261 aaPredicted RBP11.65□□□□□ -0.55
MCF2L-218ENST00000442625 GATA2P23769 480 aaPredicted RBP11.65□□□□□ -0.55
MCF2L-218ENST00000442625 Q8N976 141 aa11.65□□□□□ -0.55
MCF2L-218ENST00000442625 MDS2Q8NDY4 140 aa11.65□□□□□ -0.55
MCF2L-218ENST00000442625 OR4A16Q8NH70 328 aa11.65□□□□□ -0.55
MCF2L-218ENST00000442625 NAT8BQ9UHF3 227 aa11.65□□□□□ -0.55
MCF2L-218ENST00000442625 LAMA5O15230 3695 aa11.65□□□□□ -0.55
MCF2L-218ENST00000442625 PTPRBP23467 1997 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 DIRC3C9JPN6 131 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 M0R1X1 148 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 EFNB3Q15768 340 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 MRPL54Q6P161 138 aaKnown RBP11.64□□□□□ -0.55
MCF2L-218ENST00000442625 WDR82Q6UXN9 313 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 C1orf229Q6ZS94 237 aaPredicted RBP11.64□□□□□ -0.55
MCF2L-218ENST00000442625 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 C1orf210Q8IVY1 113 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 SIGLECL1Q8N7X8 197 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 CNEP1R1Q8N9A8 125 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 NHLRC2Q8NBF2 726 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 TAAR6Q96RI8 345 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 COL27A1Q8IZC6 1860 aaPredicted RBP11.64□□□□□ -0.55
MCF2L-218ENST00000442625 CRYBB3P26998 211 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 OPRK1P41145 380 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 AMTP48728 403 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 OCIAD2Q56VL3 154 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 STPG4Q8N801 248 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 EAF1Q96JC9 268 aaPredicted RBP11.64□□□□□ -0.55
MCF2L-218ENST00000442625 ARRDC1-AS1Q9H2J1 176 aa11.64□□□□□ -0.55
MCF2L-218ENST00000442625 GFRA3O60609 400 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 GPR12P47775 334 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 RAB7AP51149 207 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 HERV-K104P63124 156 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 COL5A1-AS1Q5SY13 56 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 PQLC2Q6ZP29 291 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 STPG3Q8N7X2 389 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 RAB1CQ92928 201 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 V9GYV3 84 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 TIMM8AO60220 97 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-218ENST00000442625 GPX1P07203 203 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 DUTP33316 252 aaKnown RBP11.63□□□□□ -0.55
MCF2L-218ENST00000442625 ZNF134P52741 427 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 UBE2V1Q13404 147 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 GABRA6Q16445 453 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 RPEL1Q2QD12 228 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 SPATA45Q537H7 98 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 CDX2Q99626 313 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-218ENST00000442625 NRN1Q9NPD7 142 aa11.63□□□□□ -0.55
MCF2L-218ENST00000442625 PRSS46E5RG02 174 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 IGFBP2P18065 325 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 NTF3P20783 257 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
MCF2L-218ENST00000442625 CENPWQ5EE01 88 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 LCN12Q6JVE5 192 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 CD177Q8N6Q3 437 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 ORAOV1Q8WV07 137 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 HEATR1Q9H583 2144 aaKnown RBP11.62□□□□□ -0.55
MCF2L-218ENST00000442625 GNG12Q9UBI6 72 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 OR10J4P0C629 311 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 CHRNB4P30926 498 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 VDAC2P45880 294 aaPredicted RBP11.62□□□□□ -0.55
MCF2L-218ENST00000442625 TRIB1Q96RU8 372 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 HSD17B10Q99714 261 aaKnown RBP11.62□□□□□ -0.55
MCF2L-218ENST00000442625 TP73-AS1Q9UF72 201 aa11.62□□□□□ -0.55
MCF2L-218ENST00000442625 ZNF83P51522 516 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 IGHV3OR15-7A0A075B7D8 119 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 A0A1W2PS18 150 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 C21orf140B9A014 251 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 SRIP30626 198 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 RBPJQ06330 500 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 PSG5Q15238 335 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 MLANAQ16655 118 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 SAMD13Q5VXD3 122 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 GMPPAQ96IJ6 420 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-218ENST00000442625 GCM1Q9NP62 436 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 SERTAD4Q9NUC0 356 aa11.61□□□□□ -0.55
MCF2L-218ENST00000442625 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-218ENST00000442625 SPINT2O43291 252 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 ZNF253O75346 499 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 NDUFB8O95169 186 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
MCF2L-218ENST00000442625 OR4C5Q8NGB2 326 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 LRRC29Q8WV35 223 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 SSBP3Q9BWW4 388 aaPredicted RBP11.6□□□□□ -0.55
MCF2L-218ENST00000442625 CXXC4Q9H2H0 198 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 C15orf65H3BRN8 121 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 RELBQ01201 579 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 DHRS13Q6UX07 377 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 STARD4Q96DR4 205 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 LINC00479Q96M42 142 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 TCF19Q9Y242 345 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 TNFRSF18Q9Y5U5 241 aa11.6□□□□□ -0.55
MCF2L-218ENST00000442625 K7ERU9 68 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 ESDP10768 282 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 GNG4P50150 75 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 LDLRAD2Q5SZI1 272 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 Q6ZN92 141 aa11.59□□□□□ -0.55
MCF2L-218ENST00000442625 ERASQ7Z444 233 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms