RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 LEUTXA8MZ59 168 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 BOLA2-SMG1P6H3BVE0 249 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 RBFOX2O43251 390 aaKnown RBP eCLIP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 PITX3O75364 302 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 B3GALNT1O75752 331 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 CCNKO75909 580 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 OR2A4O95047 310 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 CRYZL1O95825 349 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 HPRT1P00492 218 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 IGLV2-23P01705 113 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 GAPDHP04406 335 aaKnown RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 SERPINE2P07093 398 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 IL6RP08887 468 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 OR9G9P0C7N8 305 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 ANXA3P12429 323 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 CD24P25063 80 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 IL3RAP26951 378 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 CNTFRP26992 372 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 S100GP29377 79 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 G6PCP35575 357 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 KIR2DS2P43631 304 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 HABP2Q14520 560 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 SSX2Q16385 188 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 MRGPRG-AS1Q2M3A8 158 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 MOB3BQ86TA1 216 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 AKAP14Q86UN6 197 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF695Q8IW36 515 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 VKORC1L1Q8N0U8 176 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 TCTEX1D1Q8N7M0 179 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 ZBTB8BQ8NAP8 495 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 OR4D5Q8NGN0 318 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 RBPMSQ93062 196 aaKnown RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 RPEQ96AT9 228 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 ADTRPQ96IZ2 230 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 OR2A7Q96R45 310 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 ZNF436Q9C0F3 470 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 FAM212BQ9NTI7 297 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 LIN7CQ9NUP9 197 aaKnown RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 PRELID3BQ9Y3B1 194 aa3.73□□□□□ -1.81
PTPN4-206ENST00000441089 TBL2Q9Y4P3 447 aaKnown RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 AMMECR1Q9Y4X0 333 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-206ENST00000441089 UBR4Q5T4S7 5183 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 C13orf42A0A1B0GVH6 325 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 DUXBA0A1W2PPF3 345 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 C5orf51A6NDU8 294 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 FAM25EA8MYX2 175 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 OOSP1A8MZH6 123 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 H0YIZ8 118 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 PFDN1O60925 122 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 NXPH3O95157 252 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 KRASP01116 189 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 APOA2P02652 100 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 CRYGBP07316 175 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 SNRNP70P08621 437 aaKnown RBP3.72□□□□□ -1.81
PTPN4-206ENST00000441089 GIPP09681 153 aaPredicted RBP3.72□□□□□ -1.81
PTPN4-206ENST00000441089 SAA1P0DJI8 122 aaPredicted RBP3.72□□□□□ -1.81
PTPN4-206ENST00000441089 MYOD1P15172 320 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 NQO2P16083 231 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 VDAC1P21796 283 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 CD1BP29016 333 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 RAB13P51153 203 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 SRPXP78539 464 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 EBI3Q14213 229 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 POU2AF1Q16633 256 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 IAH1Q2TAA2 248 aaPredicted RBP3.72□□□□□ -1.81
PTPN4-206ENST00000441089 GSG1LQ6UXU4 331 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 SSX9Q7RTT3 188 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 PDPNQ86YL7 162 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 SBSPONQ8IVN8 264 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 TCTE3Q8IZS6 198 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 PUSL1Q8N0Z8 303 aaKnown RBP3.72□□□□□ -1.81
PTPN4-206ENST00000441089 OR8H3Q8N146 312 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 Q8N6K4 173 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 OR11H4Q8NGC9 324 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 OR4S2Q8NH73 311 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 PIFOQ8TCI5 191 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 CD300LFQ8TDQ1 290 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 LSM10Q969L4 123 aaKnown RBP3.72□□□□□ -1.81
PTPN4-206ENST00000441089 MALSU1Q96EH3 234 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 C2orf50Q96LR7 162 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 HARBI1Q96MB7 349 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 C11orf1Q9H5F2 150 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 EDA2RQ9HAV5 297 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 PLEKHA2Q9HB19 425 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 SERTAD4Q9NUC0 356 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 COMMD9Q9P000 198 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 CACNG5Q9UF02 275 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 NSG2Q9Y328 171 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 WASHC3Q9Y3C0 194 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 TMED3Q9Y3Q3 217 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 SMAD5-AS1Q9Y6J3 95 aa3.72□□□□□ -1.81
PTPN4-206ENST00000441089 A0A1B0GW64 132 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 CGB1A6NKQ9 187 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 H7C2Y5 167 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 UPK2O00526 184 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 TXNL1O43396 289 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM50AO95807 157 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 IFNA21P01568 189 aa3.71□□□□□ -1.82
PTPN4-206ENST00000441089 IGKV1D-33P01593 117 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms