RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 A0A1W2PPE3 182 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 C7orf77A4D0Y5 90 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 ZFP92A6NM28 416 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 IFNA4P05014 189 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 SAA1P0DJI8 122 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-209ENST00000440653 OR13C7P0DN81 318 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 IGHV1-8P0DP01 117 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 CCL3L1P16619 93 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 RAB5BP61020 215 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 VMA21Q3ZAQ7 101 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 RNF212Q495C1 297 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 C2orf83Q53S99 150 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 TMEM200BQ69YZ2 307 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 LCN15Q6UWW0 184 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 TGIF2LXQ8IUE1 241 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 BEND2Q8NDZ0 799 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 OR8B3Q8NGG8 313 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 NANPQ8TBE9 248 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 TMEM167AQ8TBQ9 72 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 RXFP4Q8TDU9 374 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 NEU4Q8WWR8 484 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-209ENST00000440653 FLYWCH2Q96CP2 140 aaKnown RBP7.43□□□□□ -1.22
HDAC6-209ENST00000440653 OR8B2Q96RD0 313 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 TMEM133Q9H2Q1 129 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 SLC25A22Q9H936 323 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 NPVFQ9HCQ7 196 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 CBLN4Q9NTU7 201 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 MIOXQ9UGB7 285 aa7.43□□□□□ -1.22
HDAC6-209ENST00000440653 LSM4Q9Y4Z0 139 aaKnown RBP7.43□□□□□ -1.22
HDAC6-209ENST00000440653 H3BQ15 152 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 MMP23AO75900 390 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 GOSR1O95249 250 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 MT-CO2P00403 227 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 IGHV3-7P01780 117 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 SNRNP70P08621 437 aaKnown RBP7.42□□□□□ -1.22
HDAC6-209ENST00000440653 PRRX1P54821 245 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 RPL8P62917 257 aaKnown RBP7.42□□□□□ -1.22
HDAC6-209ENST00000440653 CCL20P78556 96 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 SSX2Q16385 188 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 BSXQ3C1V8 233 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 SPINK9Q5DT21 86 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 TEPPQ6URK8 271 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 TREML4Q6UXN2 200 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 CYP2G1PQ6ZSU1 146 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 VKORC1L1Q8N0U8 176 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 RPP25LQ8N5L8 163 aaKnown RBP7.42□□□□□ -1.22
HDAC6-209ENST00000440653 NEUROG1Q92886 237 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 ST6GALNAC6Q969X2 333 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 SLC35E1Q96K37 410 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 Q96MF0 132 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 RARRES2Q99969 163 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 NABP2Q9BQ15 211 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 GGTLC1Q9BX51 225 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 COMMD5Q9GZQ3 224 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 VSIRQ9H7M9 311 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 RFNGQ9Y644 331 aa7.42□□□□□ -1.22
HDAC6-209ENST00000440653 KMT2CQ8NEZ4 4911 aaKnown RBP7.42□□□□□ -1.22
HDAC6-209ENST00000440653 YLPM1P49750 1951 aaKnown RBP7.42□□□□□ -1.22
HDAC6-209ENST00000440653 F6UZH7 168 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 TGOLN2O43493 480 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 PDE6DO43924 150 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 IGKV1D-33P01593 117 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 IGKV1-33P01594 117 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 CTRB1P17538 263 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 MAS1LP35410 378 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 LGALS7P47929 136 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 LINC00205P59089 165 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 ERVFRD-1P60508 538 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 RHOBP62745 196 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 HLA-DRB5Q30154 266 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 Q5PR19 223 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 FAM90A2PQ658T7 463 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 CTRB2Q6GPI1 263 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 LYPD2Q6UXB3 125 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 C1orf229Q6ZS94 237 aaPredicted RBP7.41□□□□□ -1.22
HDAC6-209ENST00000440653 SSX7Q7RTT5 188 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 DTX2Q86UW9 622 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 ZCCHC24Q8N2G6 241 aaKnown RBP7.41□□□□□ -1.22
HDAC6-209ENST00000440653 LINC01560Q8TB33 94 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 RAB24Q969Q5 203 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 MALSU1Q96EH3 234 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 C19orf24Q9BVV8 132 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 CLEC7AQ9BXN2 247 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 TMEM242Q9NWH2 141 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 NAT8Q9UHE5 227 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 PUS1Q9Y606 427 aaKnown RBP eCLIP7.41□□□□□ -1.22
HDAC6-209ENST00000440653 PXMP4Q9Y6I8 212 aa7.41□□□□□ -1.22
HDAC6-209ENST00000440653 DOCK11Q5JSL3 2073 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 IGHV2-26A0A0B4J1V2 119 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 TRAV3A0A0B4J244 114 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 A0A1W2PPV4 95 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 C1orf196B1AJZ1 125 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 RRHO14718 337 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 SIAH2O43255 324 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 FCN3O75636 299 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 CXorf1O96002 111 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 CA2P00918 260 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 IGKV1-16P04430 117 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 RPL29P47914 159 aaKnown RBP7.4□□□□□ -1.22
HDAC6-209ENST00000440653 SUB1P53999 127 aaKnown RBP eCLIP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms