RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 FOXL2NBQ6ZUU3 175 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 GMPPAQ96IJ6 420 aaPredicted RBP9.74□□□□□ -0.85
SMPD4-209ENST00000439886 OR8B2Q96RD0 313 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 RTL8AQ9BWD3 113 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 FNDC4Q9H6D8 234 aaPredicted RBP9.74□□□□□ -0.85
SMPD4-209ENST00000439886 OR51B2Q9Y5P1 312 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 A0A1W2PQM1 296 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 FAM90A26D6RGX4 464 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 TNFSF15O95150 251 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 MT-CO3P00414 261 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 IBA57Q5T440 356 aaKnown RBP9.74□□□□□ -0.85
SMPD4-209ENST00000439886 ZNF645Q8N7E2 425 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 SCCPDHQ8NBX0 429 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 PRDM14Q9GZV8 571 aa9.74□□□□□ -0.85
SMPD4-209ENST00000439886 POLEQ07864 2286 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 LTBP2Q14767 1821 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 IGHV5-10-1A0A0J9YXX1 117 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 ZNF503-AS2A6NEH8 195 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 SH2D7A6NKC9 451 aaPredicted RBP9.73□□□□□ -0.85
SMPD4-209ENST00000439886 ZNF207O43670 478 aaKnown RBP9.73□□□□□ -0.85
SMPD4-209ENST00000439886 CSN3P07498 182 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 OR9G9P0C7N8 305 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 PRB4P10163 310 aaPredicted RBP9.73□□□□□ -0.85
SMPD4-209ENST00000439886 LGALS4P56470 323 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 RPL8P62917 257 aaKnown RBP9.73□□□□□ -0.85
SMPD4-209ENST00000439886 MIR17HGQ75NE6 70 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 OR5B3Q8NH48 314 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 LEAP2Q969E1 77 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 CHRNA10Q9GZZ6 450 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 TRBV7-9A0A0J9YWB2 115 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 UQCRFS1P47985 274 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 ALKBH6Q3KRA9 238 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 ZNF355PQ9NSJ1 428 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 CDC42EP3Q9UKI2 254 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 WDR83OSQ9Y284 106 aa9.73□□□□□ -0.85
SMPD4-209ENST00000439886 TMEM30CPA0ZSE6 113 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 J3QT63 122 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 CELA3AP09093 270 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 CD24P25063 80 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 ZNF137PP52743 207 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 TNXAQ16473 311 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 TMEM249Q2WGJ8 235 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 LRRC10Q5BKY1 277 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 TREML4Q6UXN2 200 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 NAA38Q9BRA0 125 aaKnown RBP9.72□□□□□ -0.85
SMPD4-209ENST00000439886 PHF7Q9BWX1 381 aaPredicted RBP9.72□□□□□ -0.85
SMPD4-209ENST00000439886 LINC00473A8K010 186 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 C15orf62A8K5M9 175 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 TMPRSS2O15393 492 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 YPEL1O60688 119 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 IGHV3-48P01763 117 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 SCGB1A1P11684 91 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 SRD5A2P31213 254 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 FOLR3P41439 243 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 GABRA6Q16445 453 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 LINC00696Q6ZRV3 163 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 Q6ZS49 121 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 STPG3Q8N7X2 389 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 LINC00479Q96M42 142 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 YPEL2Q96QA6 119 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 TAAR6Q96RI8 345 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 MRPS16Q9Y3D3 137 aaKnown RBP9.72□□□□□ -0.85
SMPD4-209ENST00000439886 NCOR1O75376 2440 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 IGLV3-12A0A075B6K2 115 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 TRAV3A0A0B4J244 114 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 PSPNO60542 156 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 TSKUQ8WUA8 353 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 MGST2Q99735 147 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
SMPD4-209ENST00000439886 hDV102S1A0JD36 115 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 IGLC7A0M8Q6 106 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 SCGB2A1O75556 95 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 MYOD1P15172 320 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 CA7P43166 264 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 MOB1BQ7L9L4 216 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 SSX8Q7RTT4 187 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 C17orf82Q86X59 251 aaPredicted RBP9.71□□□□□ -0.85
SMPD4-209ENST00000439886 NANOS1Q8WY41 292 aaKnown RBP9.71□□□□□ -0.85
SMPD4-209ENST00000439886 PROK2Q9HC23 129 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 POLDIP2Q9Y2S7 368 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 ZDBF2Q9HCK1 2354 aa9.71□□□□□ -0.85
SMPD4-209ENST00000439886 TRAV8-6A0A0B4J262 113 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 MUC21A0A0G2JKD1 596 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 MUC21A0A140T8X8 626 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 TAX1BP3O14907 124 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 IGFBP2P18065 325 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 LYSMD4Q5XG99 296 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 CCDC144NLQ6NUI1 221 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 Q6ZSR3 168 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 GGTLC1Q9BX51 225 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 SH2D2AQ9NP31 389 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 CACNA1GO43497 2377 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 GGNQ86UU5 652 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 HES7Q9BYE0 225 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 MPC1Q9Y5U8 109 aa9.71□□□□□ -0.86
SMPD4-209ENST00000439886 GVINP1Q7Z2Y8 2422 aa9.7□□□□□ -0.86
SMPD4-209ENST00000439886 BMPR1BO00238 502 aa9.7□□□□□ -0.86
SMPD4-209ENST00000439886 PLAUP00749 431 aa9.7□□□□□ -0.86
SMPD4-209ENST00000439886 CRYGCP07315 174 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms