RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 RGS13O14921 159 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 IGKV3-20P01619 116 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 IGLV2-14P01704 120 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 IGHV3-48P01763 117 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 TIMM50Q3ZCQ8 353 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 HSP90B2PQ58FF3 399 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 OR4S2Q8NH73 311 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 TRUB1Q8WWH5 349 aaKnown RBP6.29□□□□□ -1.4
LSG1-202ENST00000427461 ARHGAP5-AS1Q96IT6 56 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 MYCBPQ99417 103 aaPredicted RBP6.29□□□□□ -1.4
LSG1-202ENST00000427461 ATP6V0BQ99437 205 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 UQCC2Q9BRT2 126 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 TMEM70Q9BUB7 260 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 NXF2Q9GZY0 626 aaKnown RBP6.29□□□□□ -1.4
LSG1-202ENST00000427461 GABARAPL1Q9H0R8 117 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 HRASLSQ9HDD0 168 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 SPATA2Q9UM82 520 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 TNXBP22105 4242 aa6.29□□□□□ -1.4
LSG1-202ENST00000427461 FOXI3A8MTJ6 420 aaPredicted RBP6.28□□□□□ -1.4
LSG1-202ENST00000427461 TMEM14DPA8MWL7 114 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 PRM2P04554 102 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 DEFB130BP0DP73 79 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 DEFB130AP0DP74 79 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 CD37P11049 281 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 GNRHRP30968 328 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 TAS2R43P59537 309 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 DEFB1P60022 68 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 QRFPP83859 136 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 ESRGQ1W209 222 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 YIF1BQ5BJH7 314 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 MEDAGQ5VYS4 303 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 ZNF773Q6PK81 442 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 H1FOOQ8IZA3 346 aaPredicted RBP6.28□□□□□ -1.4
LSG1-202ENST00000427461 TCTEX1D2Q8WW35 142 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 PGLYRP3Q96LB9 341 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 SLC29A1Q99808 456 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 GINS4Q9BRT9 223 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 GINS3Q9BRX5 216 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 PECRQ9BY49 303 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 FAM107BQ9H098 131 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 BET1LQ9NYM9 111 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 HSF4Q9ULV5 492 aa6.28□□□□□ -1.4
LSG1-202ENST00000427461 RBMX2Q9Y388 322 aaKnown RBP6.28□□□□□ -1.4
LSG1-202ENST00000427461 F11RQ9Y624 299 aaKnown RBP6.28□□□□□ -1.4
LSG1-202ENST00000427461 TCRBV3S1A0A5B6 114 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 CYB5BO43169 146 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 HRASP01112 189 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 UBBP0CG47 229 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 ETV1P50549 477 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 FCN2Q15485 313 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 PLAC9Q5JTB6 97 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 GDF5OSQ5U4N7 250 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 AMIGO2Q86SJ2 522 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 C1orf158Q8N1D5 194 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 NKAIN3Q8N8D7 197 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 SLC25A46Q96AG3 418 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 RNF125Q96EQ8 232 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 DERL3Q96Q80 235 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 QTRT1Q9BXR0 403 aaKnown RBP6.27□□□□□ -1.41
LSG1-202ENST00000427461 COMMD5Q9GZQ3 224 aa6.27□□□□□ -1.41
LSG1-202ENST00000427461 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
LSG1-202ENST00000427461 IGKV1D-8A0A087WSZ0 117 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 A0A1B0GU03 582 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 PNMA8CA0A1B0GUJ8 204 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 HELTA6NFD8 242 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 UPK2O00526 184 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 HBE1P02100 147 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 FCGR3AP08637 254 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 HOXB6P17509 224 aaKnown RBP6.26□□□□□ -1.41
LSG1-202ENST00000427461 GABRB1P18505 474 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 P2RY1P47900 373 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 ALDH3B2P48448 385 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
LSG1-202ENST00000427461 DHRS2Q13268 280 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 EIF4EBP1Q13541 118 aaPredicted RBP6.26□□□□□ -1.41
LSG1-202ENST00000427461 RRN3P1Q2M238 152 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 FAM89BQ8N5H3 189 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
LSG1-202ENST00000427461 HINT2Q9BX68 163 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 TAS2R8Q9NYW2 309 aa6.26□□□□□ -1.41
LSG1-202ENST00000427461 IGKV1D-13A0A0B4J2D9 117 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 TEX50A0A1B0GTY4 177 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 SNTNA6NMZ2 147 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 I3L2K1 104 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 TRAPPC2P0DI81 140 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 TRAPPC2BP0DI82 140 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 IGKV1-13P0DP09 117 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 CD36P16671 472 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 RAB6AP20340 208 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 DCKP27707 260 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 MFAP4P55083 255 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 INSL4Q14641 139 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 RCN1Q15293 331 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 C1orf100Q5SVJ3 147 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 OGFRL1Q5TC84 451 aaPredicted RBP6.25□□□□□ -1.41
LSG1-202ENST00000427461 ZNF709Q8N972 641 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 Q96MT0 163 aa6.25□□□□□ -1.41
LSG1-202ENST00000427461 C7orf50Q9BRJ6 194 aaKnown RBP6.25□□□□□ -1.41
LSG1-202ENST00000427461 SLC35B3Q9H1N7 401 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms