RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 MBD3L1Q8WWY6 194 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 CACNG8Q8WXS5 425 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 SRSF8Q9BRL6 282 aaKnown RBP11.54□□□□□ -0.56
CDK3-201ENST00000425876 KCNIP2Q9NS61 270 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 A0A1W2PRD5 423 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 A0A1W2PRF3 423 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 A0A1W2PRM7 423 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 IGKV1D-33P01593 117 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 IGKV1-33P01594 117 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 SNRNP70P08621 437 aaKnown RBP11.54□□□□□ -0.56
CDK3-201ENST00000425876 ARSJQ5FYB0 599 aaPredicted RBP11.54□□□□□ -0.56
CDK3-201ENST00000425876 PVRIGQ6DKI7 326 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 ZNF114Q8NC26 417 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
CDK3-201ENST00000425876 NRGNQ92686 78 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 EAF1Q96JC9 268 aaPredicted RBP11.54□□□□□ -0.56
CDK3-201ENST00000425876 SCRT1Q9BWW7 348 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 FBXL15Q9H469 300 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 SMDT1Q9H4I9 107 aa11.54□□□□□ -0.56
CDK3-201ENST00000425876 CSMD2Q7Z408 3487 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 IGLC7A0M8Q6 106 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 SMCO3A2RU48 225 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 NBR2O15453 112 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 OPRK1P41145 380 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 MMDQ15546 238 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 TNXAQ16473 311 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 ACSM6Q6P461 480 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 DYNAPQ8N1N2 210 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 Q8N6K4 173 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 SFT2D1Q8WV19 159 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 C1orf159Q96HA4 380 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
CDK3-201ENST00000425876 AJUBAQ96IF1 538 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 PBDC1Q9BVG4 233 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 KIAA1456Q9P272 454 aa11.53□□□□□ -0.56
CDK3-201ENST00000425876 AGPAT2O15120 278 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 OR13C7P0DN81 318 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 SRSF3P84103 164 aaKnown RBP11.52□□□□□ -0.57
CDK3-201ENST00000425876 CD69Q07108 199 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 RAB31Q13636 194 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 PEA15Q15121 130 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 GUK1Q16774 197 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 CLEC12BQ2HXU8 276 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 FFAR4Q5NUL3 377 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 TEPPQ6URK8 271 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 TMEM144Q7Z5S9 345 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 NARS2Q96I59 477 aaKnown RBP11.52□□□□□ -0.57
CDK3-201ENST00000425876 P2RX4Q99571 388 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 TREM1Q9NP99 234 aa11.52□□□□□ -0.57
CDK3-201ENST00000425876 BEX4Q9NWD9 120 aaPredicted RBP11.52□□□□□ -0.57
CDK3-201ENST00000425876 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 NPFFO15130 113 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 MSMBP08118 114 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 M6PRP20645 277 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 SAA4P35542 130 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 ELLP55199 621 aaPredicted RBP11.51□□□□□ -0.57
CDK3-201ENST00000425876 SSBP2P81877 361 aaPredicted RBP11.51□□□□□ -0.57
CDK3-201ENST00000425876 PMS2P11Q13670 270 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 PLGLAQ15195 96 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 ACOT6Q3I5F7 207 aaPredicted RBP11.51□□□□□ -0.57
CDK3-201ENST00000425876 C10orf91Q5T1B1 145 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 LRRC75A-AS1Q8N1F1 130 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 RPP25LQ8N5L8 163 aaKnown RBP11.51□□□□□ -0.57
CDK3-201ENST00000425876 MGST2Q99735 147 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 GGTLC1Q9BX51 225 aa11.51□□□□□ -0.57
CDK3-201ENST00000425876 B4DSR2 109 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 TEX22C9J3V5 150 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 TSPAN9O75954 239 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 BRS3P32247 399 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 AKR1C1Q04828 323 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 HES1Q14469 280 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 OR10G4Q8NGN3 311 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 OR10G9Q8NGN4 311 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 OR10G7Q8NGN6 311 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 C17orf50Q8WW18 174 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 SRSF12Q8WXF0 261 aaKnown RBP11.5□□□□□ -0.57
CDK3-201ENST00000425876 FAM96BQ9Y3D0 163 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 ABCA2Q9BZC7 2435 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 TEX15Q9BXT5 2789 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 CTXND1A0A1B0GTU2 59 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 FCN1O00602 326 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 CYB5BO43169 146 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 FAM106CPP0CH98 169 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 GATA3P23771 443 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 RPL29P47914 159 aaKnown RBP11.5□□□□□ -0.57
CDK3-201ENST00000425876 CCL20P78556 96 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 GAMTQ14353 236 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 HNF4GQ14541 408 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 OR1P1Q8NH06 330 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 SEC11CQ9BY50 192 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 ACTR3CQ9C0K3 210 aaPredicted RBP11.5□□□□□ -0.57
CDK3-201ENST00000425876 SLC39A9Q9NUM3 307 aa11.5□□□□□ -0.57
CDK3-201ENST00000425876 CARHSP1Q9Y2V2 147 aaKnown RBP11.5□□□□□ -0.57
CDK3-201ENST00000425876 CENPEQ02224 2701 aa11.49□□□□□ -0.57
CDK3-201ENST00000425876 A0A096LNT2 108 aa11.49□□□□□ -0.57
CDK3-201ENST00000425876 TRAV20A0A0B4J274 112 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms