RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ENY2Q9NPA8 101 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 IGHG2P01859 326 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 ARL16Q0P5N6 197 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 THAP6Q8TBB0 222 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 P2RX4Q99571 388 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 FKBP11Q9NYL4 201 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 ZNF257Q9Y2Q1 563 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 WNK1Q9H4A3 2382 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 RNASE1P07998 156 aaKnown RBP10.55□□□□□ -0.72
PRPF39-202ENST00000424478 AARDQ4LEZ3 155 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 C11orf1Q9H5F2 150 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 SCGB2A2Q13296 93 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 PRSS54Q6PEW0 395 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 PRSS22Q9GZN4 317 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 WNT10AQ9GZT5 417 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 KLK15Q9H2R5 256 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 VWFP04275 2813 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 C15orf62A8K5M9 175 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 CRYBA1P05813 215 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 DEFA4P12838 97 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 SNCAP37840 140 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 EIF2B2P49770 351 aaKnown RBP10.54□□□□□ -0.72
PRPF39-202ENST00000424478 ZFP69Q49AA0 526 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 ZNF546Q86UE3 836 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 HAPLN4Q86UW8 402 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 PRIMA1Q86XR5 153 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 SGMS2Q8NHU3 365 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 MISP3Q96FF7 219 aa10.54□□□□□ -0.72
PRPF39-202ENST00000424478 TRAV41A0A0B4J266 112 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 TCTE3Q8IZS6 198 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 SLC24A4Q8NFF2 622 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 HIPK2Q9H2X6 1198 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 ZC4H2Q9NQZ6 224 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 SERTAD4Q9NUC0 356 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 M0QZK8 103 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 RNASE2P10153 161 aaKnown RBP10.53□□□□□ -0.72
PRPF39-202ENST00000424478 SLC25A24Q6NUK1 477 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 C16orf82Q7Z2V1 217 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 STPG2Q8N412 459 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 OR2J3O76001 311 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 RLN2P04090 185 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 MDKP21741 143 aaPredicted RBP10.53□□□□□ -0.72
PRPF39-202ENST00000424478 MAS1LP35410 378 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 OR2C3Q8N628 320 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 TMEM86BQ8N661 226 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 OR5B12Q96R08 314 aa10.53□□□□□ -0.72
PRPF39-202ENST00000424478 PIGBOS1A0A0B4J2F0 54 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 FAM90A26D6RGX4 464 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 IFNA4P05014 189 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 HNRNPCP07910 306 aaKnown RBP eCLIP10.52□□□□□ -0.737e-10■■□□□ 14.3
PRPF39-202ENST00000424478 CXCL2P19875 107 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 NPY1RP25929 384 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 CLINT1Q14677 625 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.52□□□□□ -0.73
PRPF39-202ENST00000424478 MRPL36Q9P0J6 103 aaKnown RBP10.52□□□□□ -0.73
PRPF39-202ENST00000424478 RNF222A6NCQ9 220 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 FBXO24O75426 580 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 HKR1P10072 659 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 ERHP84090 104 aaKnown RBP10.52□□□□□ -0.73
PRPF39-202ENST00000424478 TMEM252Q8N6L7 170 aa10.52□□□□□ -0.73
PRPF39-202ENST00000424478 MED6O75586 246 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 CTRB1P17538 263 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 CTRB2Q6GPI1 263 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 RFNGQ9Y644 331 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 E5RGE8 158 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 CLDN34H7C241 214 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 AP4M1O00189 453 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 PF4V1P10720 104 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 RPL12P30050 165 aaKnown RBP10.51□□□□□ -0.73
PRPF39-202ENST00000424478 OR2T6Q8NHC8 308 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 LINC01006Q8NI28 216 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 RAB40CQ96S21 281 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 FNDC4Q9H6D8 234 aaPredicted RBP10.51□□□□□ -0.73
PRPF39-202ENST00000424478 LYRM2Q9NU23 88 aaPredicted RBP10.51□□□□□ -0.73
PRPF39-202ENST00000424478 STRAPQ9Y3F4 350 aaKnown RBP10.51□□□□□ -0.73
PRPF39-202ENST00000424478 IGHV3-11P01762 117 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 C1QBP02746 253 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 PVALBP20472 110 aaPredicted RBP10.51□□□□□ -0.73
PRPF39-202ENST00000424478 RPL23AP62750 156 aaKnown RBP10.51□□□□□ -0.73
PRPF39-202ENST00000424478 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
PRPF39-202ENST00000424478 PDLIM3Q53GG5 364 aaPredicted RBP10.51□□□□□ -0.73
PRPF39-202ENST00000424478 SMIM8Q96KF7 97 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 FANCD2OSQ96PS1 177 aa10.51□□□□□ -0.73
PRPF39-202ENST00000424478 MFSD2BA6NFX1 497 aa10.5□□□□□ -0.73
PRPF39-202ENST00000424478 ETV3LQ6ZN32 361 aa10.5□□□□□ -0.73
PRPF39-202ENST00000424478 NOXA1Q86UR1 476 aa10.5□□□□□ -0.73
PRPF39-202ENST00000424478 UBAC2Q8NBM4 344 aa10.5□□□□□ -0.73
PRPF39-202ENST00000424478 TNFSF18Q9UNG2 199 aa10.5□□□□□ -0.73
PRPF39-202ENST00000424478 NDUFB8O95169 186 aa10.5□□□□□ -0.73
PRPF39-202ENST00000424478 OR8U8P0C7N1 319 aa10.5□□□□□ -0.73
PRPF39-202ENST00000424478 CENPVQ7Z7K6 275 aaPredicted RBP10.5□□□□□ -0.73
PRPF39-202ENST00000424478 MFFQ9GZY8 342 aa10.5□□□□□ -0.73
PRPF39-202ENST00000424478 F11RQ9Y624 299 aaKnown RBP10.5□□□□□ -0.73
PRPF39-202ENST00000424478 IGF1P05019 195 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 PET100P0DJ07 73 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 PPIFP30405 207 aaKnown RBP10.49□□□□□ -0.73
PRPF39-202ENST00000424478 OPRK1P41145 380 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 FGL1Q08830 312 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 LGALSLQ3ZCW2 172 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms