RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ACOT6Q3I5F7 207 aaPredicted RBP9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.69□□□□□ -0.86
PTPRN-204ENST00000423636 MUC15Q8N387 334 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST1H2BHQ93079 126 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST1H2BNQ99877 126 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST1H2BMQ99879 126 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 TUBA4BQ9H853 241 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 TRBV20OR9-2A0A075B6H5 130 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 PSG5Q15238 335 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 LRRC10Q5BKY1 277 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 MISP3Q96FF7 219 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 IGHV3OR16-8A0A075B7F1 116 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 CD3EP07766 207 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 SOD3P08294 240 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 FABP4P15090 132 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 LOXP28300 417 aaPredicted RBP9.68□□□□□ -0.86
PTPRN-204ENST00000423636 CFHR2P36980 270 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 OPRK1P41145 380 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 TCL1AP56279 114 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 SSTP61278 116 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 SLC25A48Q6ZT89 311 aaKnown RBP9.68□□□□□ -0.86
PTPRN-204ENST00000423636 UNKLQ9H9P5 680 aaKnown RBP9.68□□□□□ -0.86
PTPRN-204ENST00000423636 ZNF462Q96JM2 2506 aa9.68□□□□□ -0.86
PTPRN-204ENST00000423636 IFITM10A6NMD0 228 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 C17orf112F2Z3M2 114 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 IFNA1P01562 189 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 CD33P20138 364 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 GATA4P43694 442 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 RAB7AP51149 207 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 EFNB3Q15768 340 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 RTL8BQ17RB0 113 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 FBLN7Q53RD9 439 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 OR10D4PQ8NGN7 298 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 FLYWCH2Q96CP2 140 aaKnown RBP9.67□□□□□ -0.86
PTPRN-204ENST00000423636 H7BYZ3 331 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 RBFOX2O43251 390 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPRN-204ENST00000423636 NDUFA2O43678 99 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 PYYP10082 97 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 AREGP15514 252 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 S100PP25815 95 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 GNB2P62879 340 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 FXYD3Q14802 87 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 FAM222BQ8WU58 562 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 NPIPB3Q92617 1050 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 A0A1B0GW64 132 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 KBTBD11O94819 623 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 GALR1P47211 349 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 UQCRFS1P47985 274 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 NHLH1Q02575 133 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 WT1-ASQ06250 92 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 KLF17Q5JT82 389 aaPredicted RBP9.67□□□□□ -0.86
PTPRN-204ENST00000423636 TRAT1Q6PIZ9 186 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 TEPPQ6URK8 271 aa9.67□□□□□ -0.86
PTPRN-204ENST00000423636 ZNF430Q9H8G1 570 aaPredicted RBP9.67□□□□□ -0.86
PTPRN-204ENST00000423636 TRAV34A0A0B4J273 112 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 ZNF729A6NN14 1252 aaPredicted RBP9.66□□□□□ -0.86
PTPRN-204ENST00000423636 CLDN34H7C241 214 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 FCN1O00602 326 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 CA1P00915 261 aaPredicted RBP9.66□□□□□ -0.86
PTPRN-204ENST00000423636 ORM2P19652 201 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 GAMTQ14353 236 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 TNXAQ16473 311 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 HLA-DRB5Q30154 266 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 FAM169BQ8N8A8 192 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 IMMP2LQ96T52 175 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 NPVFQ9HCQ7 196 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 FUT9Q9Y231 359 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 PTPN13Q12923 2485 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 IGHV3-35A0A0C4DH35 117 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 H0YJW9 148 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 AP4M1O00189 453 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 HRASP01112 189 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 OR5G3P0C626 314 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 CRYBB3P26998 211 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 TGIF2LXQ8IUE1 241 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 BLNKQ8WV28 456 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 NEIL1Q96FI4 390 aaPredicted RBP9.66□□□□□ -0.86
PTPRN-204ENST00000423636 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 LINC00312Q9Y6C7 94 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 S100A9P06702 114 aaKnown RBP9.66□□□□□ -0.86
PTPRN-204ENST00000423636 YPEL4Q96NS1 127 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 FBXL15Q9H469 300 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 FNDC4Q9H6D8 234 aaPredicted RBP9.66□□□□□ -0.86
PTPRN-204ENST00000423636 SONP18583 2426 aaKnown RBP9.66□□□□□ -0.86
PTPRN-204ENST00000423636 CREBBPQ92793 2442 aa9.66□□□□□ -0.86
PTPRN-204ENST00000423636 CCDC168Q8NDH2 2452 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 A0A1B0GWJ7 208 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 UPK2O00526 184 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 PLGLAQ15195 96 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 ATP6V1FQ16864 119 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 NUP37Q8NFH4 326 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 GAL3ST2Q9H3Q3 398 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 TUBG2Q9NRH3 451 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 TRAV1-1A0A0B4J248 108 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 PRSS46E5RG02 174 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 APOA2P02652 100 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 SUMO1P63165 101 aaKnown RBP9.65□□□□□ -0.86
PTPRN-204ENST00000423636 NABP2Q9BQ15 211 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 NAT8Q9UHE5 227 aa9.65□□□□□ -0.86
PTPRN-204ENST00000423636 RPL8P62917 257 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms