RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 C8orf46Q8TAG6 207 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 C1orf210Q8IVY1 113 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 FGF14Q92915 247 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 IGKV1D-8A0A087WSZ0 117 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 A0A0U1RQV1 116 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 IGHV4-39P01824 125 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM178AQ8NBL3 297 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 MAFAQ8NHW3 353 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 OR2W1Q9Y3N9 320 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 DEFA4P12838 97 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 NEGR1Q7Z3B1 354 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 ASCL2Q99929 193 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 Q8IYB0 196 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 C16orf52Q8NHV5 167 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 APOOQ9BUR5 198 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 FNDC10F2Z333 226 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 C1orf100Q5SVJ3 147 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 CNRIP1Q96F85 164 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 C20orf78Q9BR46 151 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 DEPPQ9NTK1 212 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 MRPL27Q9P0M9 148 aaKnown RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 POLDIP2Q9Y2S7 368 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 KIR2DS2P43631 304 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 RND1Q92730 232 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 NABP2Q9BQ15 211 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 HEATR5AQ86XA9 2040 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 LYPD3O95274 346 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 EPPINO95925 133 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 C3orf36Q3SXR2 165 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 TTC9CQ8N5M4 171 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 HSD17B10Q99714 261 aaKnown RBP2.88□□□□□ -1.95
SYNE1-212ENST00000423061 CLDN14O95500 239 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 CA3P07451 260 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 GCHFRP30047 84 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 PRDX4Q13162 271 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 NT5CQ8TCD5 201 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 RDH5Q92781 318 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 PKIGQ9Y2B9 76 aa2.88□□□□□ -1.95
SYNE1-212ENST00000423061 A0A1W2PRD5 423 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 A0A1W2PRF3 423 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 A0A1W2PRM7 423 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 BRI3O95415 125 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 CYYR1Q96J86 154 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 LINC00477Q96M19 166 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 MYO7BQ6PIF6 2116 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TAAR6Q96RI8 345 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 SFXN3Q9BWM7 321 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 DUSP13Q9UII6 198 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 PKDREJQ9NTG1 2253 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 A0A1W2PRE2 83 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 VGLL1Q99990 258 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM222Q9H0R3 208 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF355PQ9NSJ1 428 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 HLA-DQA1P01909 254 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 Q0VG73 95 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 Q6ZUT4 128 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 EMC6Q9BV81 110 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 SPTAN1Q13813 2472 aaKnown RBP2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TRBV9A0A0B4J1U6 114 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM8BA6NDV4 472 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 SRYQ05066 204 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 OR4F17Q8NGA8 305 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 CCL26Q9Y258 94 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 ABCA1O95477 2261 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 GAB4Q2WGN9 574 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 PIGYQ3MUY2 71 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 RPL7P18124 248 aaKnown RBP2.87□□□□□ -1.95
SYNE1-212ENST00000423061 CENPWQ5EE01 88 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 FGF22Q9HCT0 170 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 K7EN84 100 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 PAX9P55771 341 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 A0A0A6YYD4 124 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 RAX2Q96IS3 184 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 C15orf53Q8NAA6 179 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 ATP23Q9Y6H3 246 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TMEM50AO95807 157 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 SUB1P53999 127 aaKnown RBP eCLIP2.87□□□□□ -1.95
SYNE1-212ENST00000423061 Q8N976 141 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 CACNA1EQ15878 2313 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF683Q8IZ20 524 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 CCL28Q9NRJ3 127 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 SLC37A2Q8TED4 501 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 hADV38S2A0JD32 116 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 MLNRO43193 412 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 BGLAPP02818 100 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 CTLA4P16410 223 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 GRAMD2BQ96HH9 432 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 CCL5P13501 91 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TBR1Q16650 682 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 ZNF542PQ5EBM4 170 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 DDB2Q92466 427 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.87□□□□□ -1.95
SYNE1-212ENST00000423061 RNASE7Q9H1E1 156 aaKnown RBP2.87□□□□□ -1.95
SYNE1-212ENST00000423061 MRPL33O75394 65 aaKnown RBP2.87□□□□□ -1.95
SYNE1-212ENST00000423061 PSG7Q13046 419 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 C1orf61Q13536 156 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 ROS1P08922 2347 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TEX45Q8NA69 505 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 TM2D2Q9BX73 214 aa2.87□□□□□ -1.95
SYNE1-212ENST00000423061 SIGLEC15Q6ZMC9 328 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms