RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SLA2Q9H6Q3 261 aa13.24□□□□□ -0.29
COL7A1-202ENST00000422991 ZNF355PQ9NSJ1 428 aa13.24□□□□□ -0.29
COL7A1-202ENST00000422991 TCRBV4S1A1TA0A5B7 111 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 CEBPZOSA8MTT3 80 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 SSNA1O43805 119 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 PRH1P02810 166 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 TRGV3P03979 118 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 RAB9AP51151 201 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 KIAA0141Q14154 515 aaPredicted RBP13.23□□□□□ -0.29
COL7A1-202ENST00000422991 KLK9Q2XQG4 91 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 SHISA2Q6UWI4 295 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 ZNF114Q8NC26 417 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 RBKSQ9H477 322 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 ENY2Q9NPA8 101 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 KLK9Q9UKQ9 250 aa13.23□□□□□ -0.29
COL7A1-202ENST00000422991 F11RQ9Y624 299 aaKnown RBP13.23□□□□□ -0.29
COL7A1-202ENST00000422991 TRBV9A0A0B4J1U6 114 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 C13orf42A0A1B0GVH6 325 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 C5orf51A6NDU8 294 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 ADARB2-AS1A8MUL3 147 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 FAM25EA8MYX2 175 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 GOSR2O14653 212 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 TPPP2P59282 170 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 RPL23AP62750 156 aaKnown RBP13.22□□□□□ -0.29
COL7A1-202ENST00000422991 ERHP84090 104 aaKnown RBP13.22□□□□□ -0.29
COL7A1-202ENST00000422991 KHDC1LQ5JSQ8 128 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 GSG1LQ6UXU4 331 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 NDUFA11Q86Y39 141 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 FANCD2OSQ96PS1 177 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 P2RX4Q99571 388 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 DMRT1Q9Y5R6 373 aa13.22□□□□□ -0.29
COL7A1-202ENST00000422991 TSSC4Q9Y5U2 329 aaPredicted RBP13.22□□□□□ -0.29
COL7A1-202ENST00000422991 IGLV11-55A0A075B6I3 123 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 DEFA4P12838 97 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 HIST1H1BP16401 226 aaKnown RBP13.21□□□□□ -0.29
COL7A1-202ENST00000422991 NKX2-1P43699 371 aaPredicted RBP13.21□□□□□ -0.29
COL7A1-202ENST00000422991 MFAP2P55001 183 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 RHOGP84095 191 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 DEFA5Q01523 94 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 BSXQ3C1V8 233 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 C11orf87Q6NUJ2 197 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 ZNF491Q8N8L2 437 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 OR1P1Q8NH06 330 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 DTD1Q8TEA8 209 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 C2orf50Q96LR7 162 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 HEYLQ9NQ87 328 aaPredicted RBP13.21□□□□□ -0.29
COL7A1-202ENST00000422991 ZFP57Q9NU63 452 aa13.21□□□□□ -0.29
COL7A1-202ENST00000422991 FAM223BA6NKX1 122 aa13.2□□□□□ -0.3
COL7A1-202ENST00000422991 MED6O75586 246 aa13.2□□□□□ -0.3
COL7A1-202ENST00000422991 RNASE2P10153 161 aaKnown RBP13.2□□□□□ -0.3
COL7A1-202ENST00000422991 ID3Q02535 119 aa13.2□□□□□ -0.3
COL7A1-202ENST00000422991 FAM223AQ8IWN6 122 aa13.2□□□□□ -0.3
COL7A1-202ENST00000422991 NECAP1Q8NC96 275 aa13.2□□□□□ -0.3
COL7A1-202ENST00000422991 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
COL7A1-202ENST00000422991 MAGT1Q9H0U3 335 aa13.2□□□□□ -0.3
COL7A1-202ENST00000422991 GSKIPQ9P0R6 139 aa13.2□□□□□ -0.3
COL7A1-202ENST00000422991 A0A1W2PRX2 142 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 CYB5BO43169 146 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 SYNGR2O43760 224 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 OR2J3O76001 311 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 SIX6O95475 246 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 SNCAP37840 140 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 CDX1P47902 265 aaPredicted RBP13.19□□□□□ -0.3
COL7A1-202ENST00000422991 NSUN5P1Q3KNT7 163 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 C18orf65Q6ZTR6 163 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 OR1L6Q8NGR2 347 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 HIPK2Q9H2X6 1198 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 GNB4Q9HAV0 340 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 MGAT4CQ9UBM8 478 aa13.19□□□□□ -0.3
COL7A1-202ENST00000422991 NBEAL1Q6ZS30 2694 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 SCGB1D2O95969 90 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 MBPP02686 304 aaPredicted RBP13.18□□□□□ -0.3
COL7A1-202ENST00000422991 IAPPP10997 89 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 HTR2BP41595 481 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 H2BFSP57053 126 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 IL15RAQ13261 267 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 PVRIGQ6DKI7 326 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 KLHL30-AS1Q8NEE0 82 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 SLC24A4Q8NFF2 622 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 C4orf3Q8WVX3 66 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 USMG5Q96IX5 58 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 MED28Q9H204 178 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 FBXL7Q9UJT9 491 aa13.18□□□□□ -0.3
COL7A1-202ENST00000422991 RCL1Q9Y2P8 373 aaKnown RBP13.18□□□□□ -0.3
COL7A1-202ENST00000422991 A0A0G2JLM5 398 aa13.17□□□□□ -0.3
COL7A1-202ENST00000422991 SSSCA1O60232 199 aa13.17□□□□□ -0.3
COL7A1-202ENST00000422991 NDUFB8O95169 186 aa13.17□□□□□ -0.3
COL7A1-202ENST00000422991 SUB1P53999 127 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL7A1-202ENST00000422991 POLR2GP62487 172 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL7A1-202ENST00000422991 C15orf32Q32M92 178 aa13.17□□□□□ -0.3
COL7A1-202ENST00000422991 SLC25A24Q6NUK1 477 aa13.17□□□□□ -0.3
COL7A1-202ENST00000422991 CIB3Q96Q77 187 aaPredicted RBP13.17□□□□□ -0.3
COL7A1-202ENST00000422991 PKD1L1Q8TDX9 2849 aa13.17□□□□□ -0.3
COL7A1-202ENST00000422991 NUDT19A8MXV4 375 aa13.16□□□□□ -0.3
COL7A1-202ENST00000422991 I3L521 148 aa13.16□□□□□ -0.3
COL7A1-202ENST00000422991 WRBO00258 174 aa13.16□□□□□ -0.3
COL7A1-202ENST00000422991 LY86O95711 162 aa13.16□□□□□ -0.3
COL7A1-202ENST00000422991 IGHV3-11P01762 117 aa13.16□□□□□ -0.3
COL7A1-202ENST00000422991 LGALS1P09382 135 aaKnown RBP13.16□□□□□ -0.3
COL7A1-202ENST00000422991 NPY1RP25929 384 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms