RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 SPINK9Q5DT21 86 aa10.4□□□□□ -0.74
CNN3-203ENST00000415017 C9orf152Q5JTZ5 239 aa10.4□□□□□ -0.74
CNN3-203ENST00000415017 PRSS54Q6PEW0 395 aa10.4□□□□□ -0.74
CNN3-203ENST00000415017 RNF152Q8N8N0 203 aa10.4□□□□□ -0.74
CNN3-203ENST00000415017 TAF15Q92804 592 aaKnown RBP eCLIP10.4□□□□□ -0.74
CNN3-203ENST00000415017 NOL4LQ96MY1 436 aaPredicted RBP10.4□□□□□ -0.74
CNN3-203ENST00000415017 FANCD2OSQ96PS1 177 aa10.4□□□□□ -0.74
CNN3-203ENST00000415017 P2RX4Q99571 388 aa10.4□□□□□ -0.74
CNN3-203ENST00000415017 U3KQ87 197 aa10.4□□□□□ -0.74
CNN3-203ENST00000415017 TRBV9A0A0B4J1U6 114 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 C15orf62A8K5M9 175 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 PMS2P5A8MQ11 134 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 CEBPZOSA8MTT3 80 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 PRSS46E5RG02 174 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 H3BUA1 57 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 TSC22D2O75157 780 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 CCNKO75909 580 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 IGHG4P01861 327 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 CRYBA1P05813 215 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 HTR2BP41595 481 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 ERHP84090 104 aaKnown RBP10.39□□□□□ -0.75
CNN3-203ENST00000415017 SRSF2Q01130 221 aaKnown RBP10.39□□□□□ -0.75
CNN3-203ENST00000415017 FGL1Q08830 312 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 TMEM65Q6PI78 240 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 UNQ5815/PRO19632Q6UWF5 114 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 TMEM14EPQ6UXP3 125 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 MRPL41Q8IXM3 137 aaKnown RBP10.39□□□□□ -0.75
CNN3-203ENST00000415017 OR2T35Q8NGX2 323 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 OR1P1Q8NH06 330 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 MYOZ3Q8TDC0 251 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 HIPK2Q9H2X6 1198 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 HEYLQ9NQ87 328 aaPredicted RBP10.39□□□□□ -0.75
CNN3-203ENST00000415017 OR5AC2Q9NZP5 309 aa10.39□□□□□ -0.75
CNN3-203ENST00000415017 F11RQ9Y624 299 aaKnown RBP10.39□□□□□ -0.75
CNN3-203ENST00000415017 IGLV11-55A0A075B6I3 123 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 E5RGE8 158 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 WRBO00258 174 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 SSSCA1O60232 199 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 SCGB1D2O95969 90 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 PSMB8P28062 276 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 HOXA1P49639 335 aaPredicted RBP10.38□□□□□ -0.75
CNN3-203ENST00000415017 PROK1P58294 105 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 AKAP14Q86UN6 197 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 OR1L6Q8NGR2 347 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 OR4C12Q96R67 309 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 HINT2Q9BX68 163 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 GON7Q9BXV9 100 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 LYRM2Q9NU23 88 aaPredicted RBP10.38□□□□□ -0.75
CNN3-203ENST00000415017 LINC00527Q9UJ94 153 aa10.38□□□□□ -0.75
CNN3-203ENST00000415017 LSM5Q9Y4Y9 91 aaKnown RBP10.38□□□□□ -0.75
CNN3-203ENST00000415017 A0A1B0GUS0 222 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 CLPSL1A2RUU4 121 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 REG1AP05451 166 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 PET100P0DJ07 73 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 APELAP0DMC3 54 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 IAPPP10997 89 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 P2RY1P47900 373 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 CD300CQ08708 224 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 KIAA0141Q14154 515 aaPredicted RBP10.37□□□□□ -0.75
CNN3-203ENST00000415017 ECSCRQ19T08 205 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 C19orf35Q6ZS72 473 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
CNN3-203ENST00000415017 SLC24A4Q8NFF2 622 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 OR4F5Q8NH21 305 aa10.37□□□□□ -0.75
CNN3-203ENST00000415017 HMSDA8MTL9 139 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 RLN2P04090 185 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 PVALBP20472 110 aaPredicted RBP10.36□□□□□ -0.75
CNN3-203ENST00000415017 NPY1RP25929 384 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 S100A10P60903 97 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 RPL23AP62750 156 aaKnown RBP10.36□□□□□ -0.75
CNN3-203ENST00000415017 FOXE3Q13461 319 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 LRRC37A5PQ49AS3 106 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 COMMD1Q8N668 190 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 OR5T1Q8NG75 326 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 OR11H4Q8NGC9 324 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 ABHD5Q8WTS1 349 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 ENY2Q9NPA8 101 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 PSENENQ9NZ42 101 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 MBD2Q9UBB5 411 aa10.36□□□□□ -0.75
CNN3-203ENST00000415017 PSMB11A5LHX3 300 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 I3L2K1 104 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 C1QBP02746 253 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 ELANEP08246 267 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 HIST1H1BP16401 226 aaKnown RBP10.35□□□□□ -0.75
CNN3-203ENST00000415017 SNCAP37840 140 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 SUB1P53999 127 aaKnown RBP eCLIP10.35□□□□□ -0.75
CNN3-203ENST00000415017 KRTAP24-1Q3LI83 254 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 TCTEX1D4Q5JR98 221 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 C10orf99Q6UWK7 81 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 NOXA1Q86UR1 476 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 HAPLN4Q86UW8 402 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 TMEM252Q8N6L7 170 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 THAP6Q8TBB0 222 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 RNASEH2CQ8TDP1 164 aaKnown RBP10.35□□□□□ -0.75
CNN3-203ENST00000415017 SLA2Q9H6Q3 261 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 TNFSF18Q9UNG2 199 aa10.35□□□□□ -0.75
CNN3-203ENST00000415017 STRAPQ9Y3F4 350 aaKnown RBP10.35□□□□□ -0.75
CNN3-203ENST00000415017 IGSF23A1L1A6 192 aa10.34□□□□□ -0.75
CNN3-203ENST00000415017 RNF222A6NCQ9 220 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms