RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 PRRC2CQ9Y520 2896 aaKnown RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 RYR2Q92736 4967 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 CSPG4Q6UVK1 2322 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 MXRA5Q9NR99 2828 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 TRAV27A0A087WT01 109 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 A0A087WUJ7 227 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 IGHV2OR16-5A0A0B4J2B6 119 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 A0A1W2PPR1 153 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 A0A1W2PQD3 144 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 A0A1W2PRG6 482 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 M0R1B8 84 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 ANGPTL7O43827 346 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 IGHG2P01859 326 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 HIST1H1EP10412 219 aaKnown RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 GABRR1P24046 479 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 CXCR1P25024 350 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 RPS10P46783 165 aaKnown RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 UBE2AP49459 152 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 OR12D2P58182 307 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 ZNF117Q03924 483 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 COA6Q5JTJ3 125 aaKnown RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 SLC25A30Q5SVS4 291 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 MARCH3Q86UD3 253 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 DRAM1Q8N682 238 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 OR9Q1Q8NGQ5 310 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 OR5W2Q8NH69 310 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 RGP1Q92546 391 aaPredicted RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 HSD17B10Q99714 261 aaKnown RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 RTBDNQ9BSG5 229 aaPredicted RBP1.83□□□□□ -2.12
MCF2-204ENST00000414978 FAAP24Q9BTP7 215 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 MND1Q9BWT6 205 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 MED29Q9NX70 200 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 RAB22AQ9UL26 194 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 PSG8Q9UQ74 426 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 SIGLEC7Q9Y286 467 aa1.83□□□□□ -2.12
MCF2-204ENST00000414978 SLC22A1O15245 554 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 SLC22A5O76082 557 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 NDUFB2O95178 105 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 PTHP01270 115 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 HLA-DPB1P04440 258 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 OR5AL1P0C617 328 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ZNF708P17019 499 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 PYCR1P32322 319 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 RCVRNP35243 200 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 SERPINB10P48595 397 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 LSM3P62310 102 aaKnown RBP1.82□□□□□ -2.12
MCF2-204ENST00000414978 BAXQ07812 192 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ERCC8Q13216 396 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 TMEM183BQ1AE95 376 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 KLHL12Q53G59 568 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ATP5L2Q7Z4Y8 100 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 LINC01551Q86U37 167 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 COMMD7Q86VX2 200 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 TMEM183AQ8IXX5 376 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 NKAPP1Q8N9T2 125 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 APCDD1LQ8NCL9 501 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 OR10X1Q8NGY0 326 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ERMAPQ96PL5 475 aaPredicted RBP1.82□□□□□ -2.12
MCF2-204ENST00000414978 MGLLQ99685 303 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 SFXN3Q9BWM7 321 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 VSIRQ9H7M9 311 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 NUBP2Q9Y5Y2 271 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ZFHX3Q15911 3703 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 FAM183AA6NL82 134 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 BHLHE40O14503 412 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 TP53I11O14683 189 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 OR2J2O76002 312 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 TSPAN19P0C672 248 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 SLC6A1P30531 599 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 POLR2HP52434 150 aaKnown RBP1.82□□□□□ -2.12
MCF2-204ENST00000414978 FMODQ06828 376 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 QPRTQ15274 297 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 CLEC12BQ2HXU8 276 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 HLA-DRB5Q30154 266 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 GRINAQ7Z429 371 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 Q8N402 240 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ZHX1-C8orf76Q96EF9 292 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 MROQ9BYG7 248 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 SLC25A39Q9BZJ4 359 aaPredicted RBP1.82□□□□□ -2.12
MCF2-204ENST00000414978 ARL6Q9H0F7 186 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 ZNF702PQ9H963 129 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 CMC2Q9NRP2 79 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 IER3IP1Q9Y5U9 82 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 MTORP42345 2549 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 TRRAPQ9Y4A5 3859 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 IGKV1D-42A0A075B6H8 117 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 TRAV36DV7A0A075B6V5 113 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 TMED7-TICAM2A0A0A6YYA0 188 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 RGS5O15539 181 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 IGF2P01344 180 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 OCM2P0CE71 109 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 IGHV3-43DP0DP04 118 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 GATA2P23769 480 aaPredicted RBP1.82□□□□□ -2.12
MCF2-204ENST00000414978 GADD45AP24522 165 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 WNT4P56705 351 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 FXYD6P3P58550 94 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 RAB2AP61019 212 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 NCS1P62166 190 aa1.82□□□□□ -2.12
MCF2-204ENST00000414978 GRB2P62993 217 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms