RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 IFNA10P01566 189 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 IFNA5P01569 189 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 HLA-DRB1P01911 266 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 FAM106CPP0CH98 169 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 RPL27AP46776 148 aaKnown RBP6.56□□□□□ -1.36
HDAC9-207ENST00000413509 RAB5CP51148 216 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 RAB14P61106 215 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 RAB11AP62491 216 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 TUSC1Q2TAM9 212 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 FAM120AOSQ5T036 256 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 RUSC1-AS1Q66K80 236 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 OR8G2PQ6IF36 304 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 ETV3LQ6ZN32 361 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 C9orf139Q6ZV77 190 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 HSD17B13Q7Z5P4 300 aaPredicted RBP6.56□□□□□ -1.36
HDAC9-207ENST00000413509 LURAP1LQ8IV03 231 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 MRPL41Q8IXM3 137 aaKnown RBP6.56□□□□□ -1.36
HDAC9-207ENST00000413509 LILRB2Q8N423 598 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 OR2G3Q8NGZ4 309 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 LYPD6BQ8NI32 183 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 RNF141Q8WVD5 230 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 TAF15Q92804 592 aaKnown RBP eCLIP6.56□□□□□ -1.36
HDAC9-207ENST00000413509 WDR61Q9GZS3 305 aaKnown RBP6.56□□□□□ -1.36
HDAC9-207ENST00000413509 SH3BGRL3Q9H299 93 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 UQCC1Q9NVA1 299 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 WDR83OSQ9Y284 106 aa6.56□□□□□ -1.36
HDAC9-207ENST00000413509 LSM4Q9Y4Z0 139 aaKnown RBP6.56□□□□□ -1.36
HDAC9-207ENST00000413509 UMAD1C9J7I0 102 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 TRIM77I1YAP6 450 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 ATP6V1G1O75348 118 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 MPDU1O75352 247 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 OPN1MWP04001 364 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 OPN1MW2P0DN77 364 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 OPN1MW3P0DN78 364 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 TMEM11P17152 192 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 CD24P25063 80 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 GPX4P36969 197 aaPredicted RBP6.55□□□□□ -1.36
HDAC9-207ENST00000413509 ERHP84090 104 aaKnown RBP6.55□□□□□ -1.36
HDAC9-207ENST00000413509 TNXAQ16473 311 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 KLK9Q2XQG4 91 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 ARSJQ5FYB0 599 aaPredicted RBP6.55□□□□□ -1.36
HDAC9-207ENST00000413509 ZNF562Q6V9R5 426 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 BRD3OSQ6XYD6 125 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 SLC7A5P1Q8MH63 180 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 Q8N9W7 124 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 HSD17B11Q8NBQ5 300 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 WFDC11Q8NEX6 87 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 RNASEH2CQ8TDP1 164 aaKnown RBP6.55□□□□□ -1.36
HDAC9-207ENST00000413509 SRSF12Q8WXF0 261 aaKnown RBP6.55□□□□□ -1.36
HDAC9-207ENST00000413509 CXorf58Q96LI9 332 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 P2RX4Q99571 388 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 HINT2Q9BX68 163 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 KIAA1456Q9P272 454 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 KLK9Q9UKQ9 250 aa6.55□□□□□ -1.36
HDAC9-207ENST00000413509 ACANP16112 2415 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 IGHV3OR16-10A0A075B7F0 116 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 UBE2L5PA0A1B0GUS4 154 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 TGFAP01135 160 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 CRYGCP07315 174 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 AREGP15514 252 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 MFAP2P55001 183 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 SERF2P84101 59 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 NDPQ00604 133 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 RUNX1Q01196 453 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 HES1Q14469 280 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 HNF4GQ14541 408 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 CYB5R2Q6BCY4 276 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 TREML4Q6UXN2 200 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 DPPA3Q6W0C5 159 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 EIF4E3Q8N5X7 224 aaKnown RBP6.54□□□□□ -1.36
HDAC9-207ENST00000413509 MAPK1IP1LQ8NDC0 245 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 OR1P1Q8NH06 330 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 PCNPQ8WW12 178 aaKnown RBP6.54□□□□□ -1.36
HDAC9-207ENST00000413509 CACNG8Q8WXS5 425 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 RBM14Q96PK6 669 aaKnown RBP6.54□□□□□ -1.36
HDAC9-207ENST00000413509 PARP11Q9NR21 331 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 C1RLQ9NZP8 487 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 DMRT1Q9Y5R6 373 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 F11RQ9Y624 299 aaKnown RBP6.54□□□□□ -1.36
HDAC9-207ENST00000413509 RFNGQ9Y644 331 aa6.54□□□□□ -1.36
HDAC9-207ENST00000413509 IGHV7-81A0A0B4J1V7 117 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 A6NDX4 124 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 MFSD2BA6NFX1 497 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 NPIPB5A8MRT5 1133 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 SOX15O60248 233 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 ACTL6BO94805 426 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 IFNA4P05014 189 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 FBP1P09467 338 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 OR13C7P0DN81 318 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 EGR2P11161 476 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-207ENST00000413509 CTRB1P17538 263 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 FGF7P21781 194 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 SNCAP37840 140 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 CRIP2P52943 208 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-207ENST00000413509 SUB1P53999 127 aaKnown RBP eCLIP6.53□□□□□ -1.36
HDAC9-207ENST00000413509 CX3CL1P78423 397 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 BLOC1S1P78537 153 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 CD69Q07108 199 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 KRTAP1-1Q07627 177 aa6.53□□□□□ -1.36
HDAC9-207ENST00000413509 FXYD3Q14802 87 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms