RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 MGAT4CQ9UBM8 478 aa16.11■□□□□ 0.17
C4orf48-202ENST00000409860 TCRBV4S1A1TA0A5B7 111 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 WRBO00258 174 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 BRI3O95415 125 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 SCGB1D2O95969 90 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 TRGV3P03979 118 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 SNCAP37840 140 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 RAB9AP51151 201 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 TPPP2P59282 170 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 OR1L6Q8NGR2 347 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 DTD1Q8TEA8 209 aa16.1■□□□□ 0.17
C4orf48-202ENST00000409860 F11RQ9Y624 299 aaKnown RBP16.1■□□□□ 0.17
C4orf48-202ENST00000409860 PRH1P02810 166 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 RPLP1P05386 114 aaKnown RBP16.09■□□□□ 0.17
C4orf48-202ENST00000409860 HIST1H1BP16401 226 aaKnown RBP16.09■□□□□ 0.17
C4orf48-202ENST00000409860 CD83Q01151 205 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 ID3Q02535 119 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 TCTEX1D4Q5JR98 221 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 C19orf35Q6ZS72 473 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 LCNL1Q6ZST4 164 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 ZNF114Q8NC26 417 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 CITED1Q99966 193 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 MAGT1Q9H0U3 335 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 KLK15Q9H2R5 256 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 COL6A5A8TX70 2615 aa16.09■□□□□ 0.17
C4orf48-202ENST00000409860 SYNGR2O43760 224 aa16.08■□□□□ 0.16
C4orf48-202ENST00000409860 SIX6O95475 246 aa16.08■□□□□ 0.16
C4orf48-202ENST00000409860 SUB1P53999 127 aaKnown RBP eCLIP16.08■□□□□ 0.16
C4orf48-202ENST00000409860 SRSF4Q08170 494 aaKnown RBP16.08■□□□□ 0.16
C4orf48-202ENST00000409860 SHISA2Q6UWI4 295 aa16.08■□□□□ 0.16
C4orf48-202ENST00000409860 OR1P1Q8NH06 330 aa16.08■□□□□ 0.16
C4orf48-202ENST00000409860 CIB3Q96Q77 187 aaPredicted RBP16.08■□□□□ 0.16
C4orf48-202ENST00000409860 P2RX4Q99571 388 aa16.08■□□□□ 0.16
C4orf48-202ENST00000409860 CITED2Q99967 270 aaPredicted RBP16.08■□□□□ 0.16
C4orf48-202ENST00000409860 ZFP57Q9NU63 452 aa16.08■□□□□ 0.16
C4orf48-202ENST00000409860 TSSC4Q9Y5U2 329 aaPredicted RBP16.08■□□□□ 0.16
C4orf48-202ENST00000409860 LY86O95711 162 aa16.07■□□□□ 0.16
C4orf48-202ENST00000409860 HTR2BP41595 481 aa16.07■□□□□ 0.16
C4orf48-202ENST00000409860 RHOGP84095 191 aa16.07■□□□□ 0.16
C4orf48-202ENST00000409860 CYCSP99999 105 aaKnown RBP16.07■□□□□ 0.16
C4orf48-202ENST00000409860 SLC25A24Q6NUK1 477 aa16.07■□□□□ 0.16
C4orf48-202ENST00000409860 MYOZ3Q8TDC0 251 aa16.07■□□□□ 0.16
C4orf48-202ENST00000409860 THYN1Q9P016 225 aa16.07■□□□□ 0.16
C4orf48-202ENST00000409860 TET2Q6N021 2002 aaPredicted RBP16.06■□□□□ 0.16
C4orf48-202ENST00000409860 IGLV11-55A0A075B6I3 123 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 TRBV9A0A0B4J1U6 114 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 A0A0G2JLM5 398 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 FAM223BA6NKX1 122 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 OR2J3O76001 311 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 IAPPP10997 89 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 RRAS2P62070 204 aaPredicted RBP16.06■□□□□ 0.16
C4orf48-202ENST00000409860 POLR2GP62487 172 aaKnown RBP eCLIP16.06■□□□□ 0.16
C4orf48-202ENST00000409860 RPL23AP62750 156 aaKnown RBP16.06■□□□□ 0.16
C4orf48-202ENST00000409860 FCN2Q15485 313 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 KLK9Q2XQG4 91 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 FAM223AQ8IWN6 122 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 NECAP1Q8NC96 275 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 SLC24A4Q8NFF2 622 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 USMG5Q96IX5 58 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 FANCD2OSQ96PS1 177 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 NMES1Q9C002 83 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 KLK9Q9UKQ9 250 aa16.06■□□□□ 0.16
C4orf48-202ENST00000409860 SSSCA1O60232 199 aa16.05■□□□□ 0.16
C4orf48-202ENST00000409860 MBPP02686 304 aaPredicted RBP16.05■□□□□ 0.16
C4orf48-202ENST00000409860 RNASE2P10153 161 aaKnown RBP16.05■□□□□ 0.16
C4orf48-202ENST00000409860 NOXA1Q86UR1 476 aa16.05■□□□□ 0.16
C4orf48-202ENST00000409860 NDUFA11Q86Y39 141 aa16.05■□□□□ 0.16
C4orf48-202ENST00000409860 ZNF491Q8N8L2 437 aa16.05■□□□□ 0.16
C4orf48-202ENST00000409860 UBE2E2Q96LR5 201 aa16.05■□□□□ 0.16
C4orf48-202ENST00000409860 FBXL7Q9UJT9 491 aa16.05■□□□□ 0.16
C4orf48-202ENST00000409860 U3KQ87 197 aa16.05■□□□□ 0.16
C4orf48-202ENST00000409860 IFNA10P01566 189 aa16.04■□□□□ 0.16
C4orf48-202ENST00000409860 NPY1RP25929 384 aa16.04■□□□□ 0.16
C4orf48-202ENST00000409860 H2BFSP57053 126 aa16.04■□□□□ 0.16
C4orf48-202ENST00000409860 S100A10P60903 97 aa16.04■□□□□ 0.16
C4orf48-202ENST00000409860 RPP30P78346 268 aaKnown RBP16.04■□□□□ 0.16
C4orf48-202ENST00000409860 ATP5G2Q06055 141 aa16.04■□□□□ 0.16
C4orf48-202ENST00000409860 BSXQ3C1V8 233 aa16.04■□□□□ 0.16
C4orf48-202ENST00000409860 HIST2H2BDQ6DRA6 164 aa16.04■□□□□ 0.16
C4orf48-202ENST00000409860 C11orf87Q6NUJ2 197 aa16.04■□□□□ 0.16
C4orf48-202ENST00000409860 RAB40CQ96S21 281 aa16.04■□□□□ 0.16
C4orf48-202ENST00000409860 LSM5Q9Y4Y9 91 aaKnown RBP16.04■□□□□ 0.16
C4orf48-202ENST00000409860 A0A1W2PRX2 142 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 NUDT19A8MXV4 375 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 CORTO00230 105 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 CDX1P47902 265 aaPredicted RBP16.03■□□□□ 0.16
C4orf48-202ENST00000409860 MFAP2P55001 183 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 ATP5IP56385 69 aaPredicted RBP16.03■□□□□ 0.16
C4orf48-202ENST00000409860 DEFA5Q01523 94 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 IL15RAQ13261 267 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 KIAA0141Q14154 515 aaPredicted RBP16.03■□□□□ 0.16
C4orf48-202ENST00000409860 C15orf32Q32M92 178 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 C2orf83Q53S99 150 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 Q6ZNX1 250 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 MISP3Q96FF7 219 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 RCL1Q9Y2P8 373 aaKnown RBP16.03■□□□□ 0.16
C4orf48-202ENST00000409860 DMRT1Q9Y5R6 373 aa16.03■□□□□ 0.16
C4orf48-202ENST00000409860 K7EPK0 472 aa16.02■□□□□ 0.16
C4orf48-202ENST00000409860 L7N2F9 121 aa16.02■□□□□ 0.16
C4orf48-202ENST00000409860 NDUFB8O95169 186 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms