RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ID3Q02535 119 aa12.96□□□□□ -0.33
SUMO1-208ENST00000409627 KLK15Q9H2R5 256 aa12.96□□□□□ -0.33
SUMO1-208ENST00000409627 ZNF355PQ9NSJ1 428 aa12.96□□□□□ -0.33
SUMO1-208ENST00000409627 F11RQ9Y624 299 aaKnown RBP12.96□□□□□ -0.33
SUMO1-208ENST00000409627 TRBV9A0A0B4J1U6 114 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 CYB5BO43169 146 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 RPLP1P05386 114 aaKnown RBP12.95□□□□□ -0.34
SUMO1-208ENST00000409627 DEFA4P12838 97 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 HIST1H1BP16401 226 aaKnown RBP12.95□□□□□ -0.34
SUMO1-208ENST00000409627 NKX2-1P43699 371 aaPredicted RBP12.95□□□□□ -0.34
SUMO1-208ENST00000409627 TPPP2P59282 170 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 SRSF4Q08170 494 aaKnown RBP12.95□□□□□ -0.34
SUMO1-208ENST00000409627 C19orf35Q6ZS72 473 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 C11orf44Q8N8P7 122 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 OR1L6Q8NGR2 347 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 DTD1Q8TEA8 209 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
SUMO1-208ENST00000409627 HIPK2Q9H2X6 1198 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 ZFP57Q9NU63 452 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 GSKIPQ9P0R6 139 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 MGAT4CQ9UBM8 478 aa12.95□□□□□ -0.34
SUMO1-208ENST00000409627 IGLV11-55A0A075B6I3 123 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 TCRBV4S1A1TA0A5B7 111 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 SYNGR2O43760 224 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 PRH1P02810 166 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 TRGV3P03979 118 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 SNCAP37840 140 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 BSXQ3C1V8 233 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 SHISA2Q6UWI4 295 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 LCNL1Q6ZST4 164 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 MS4A10Q96PG2 267 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 FANCD2OSQ96PS1 177 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 P2RX4Q99571 388 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 MED28Q9H204 178 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 HEYLQ9NQ87 328 aaPredicted RBP12.94□□□□□ -0.34
SUMO1-208ENST00000409627 TSSC4Q9Y5U2 329 aaPredicted RBP12.94□□□□□ -0.34
SUMO1-208ENST00000409627 COL6A5A8TX70 2615 aa12.94□□□□□ -0.34
SUMO1-208ENST00000409627 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 SIX6O95475 246 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 LY86O95711 162 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 SCGB1D2O95969 90 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 RNASE2P10153 161 aaKnown RBP12.93□□□□□ -0.34
SUMO1-208ENST00000409627 HTR2BP41595 481 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 RPL23AP62750 156 aaKnown RBP12.93□□□□□ -0.34
SUMO1-208ENST00000409627 IL15RAQ13261 267 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 KIAA0141Q14154 515 aaPredicted RBP12.93□□□□□ -0.34
SUMO1-208ENST00000409627 NDUFA11Q86Y39 141 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 ZNF491Q8N8L2 437 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 NECAP1Q8NC96 275 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 USMG5Q96IX5 58 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 UBE2E2Q96LR5 201 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 CIB3Q96Q77 187 aaPredicted RBP12.93□□□□□ -0.34
SUMO1-208ENST00000409627 NMES1Q9C002 83 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 MAGT1Q9H0U3 335 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 DMRT1Q9Y5R6 373 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 TENM1Q9UKZ4 2725 aa12.93□□□□□ -0.34
SUMO1-208ENST00000409627 A0A0G2JLM5 398 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 WRBO00258 174 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 OR2J3O76001 311 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 MBPP02686 304 aaPredicted RBP12.92□□□□□ -0.34
SUMO1-208ENST00000409627 CDX1P47902 265 aaPredicted RBP12.92□□□□□ -0.34
SUMO1-208ENST00000409627 SUB1P53999 127 aaKnown RBP eCLIP12.92□□□□□ -0.34
SUMO1-208ENST00000409627 MFAP2P55001 183 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 H2BFSP57053 126 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 RRAS2P62070 204 aaPredicted RBP12.92□□□□□ -0.34
SUMO1-208ENST00000409627 POLR2GP62487 172 aaKnown RBP eCLIP12.92□□□□□ -0.34
SUMO1-208ENST00000409627 RHOGP84095 191 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 CYCSP99999 105 aaKnown RBP12.92□□□□□ -0.34
SUMO1-208ENST00000409627 FCN2Q15485 313 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 KHDC1LQ5JSQ8 128 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 PVRIGQ6DKI7 326 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 SLC24A4Q8NFF2 622 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 THYN1Q9P016 225 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 RCL1Q9Y2P8 373 aaKnown RBP12.92□□□□□ -0.34
SUMO1-208ENST00000409627 U3KQ87 197 aa12.92□□□□□ -0.34
SUMO1-208ENST00000409627 ADARB2-AS1A8MUL3 147 aa12.91□□□□□ -0.34
SUMO1-208ENST00000409627 IAPPP10997 89 aa12.91□□□□□ -0.34
SUMO1-208ENST00000409627 ATP5IP56385 69 aaPredicted RBP12.91□□□□□ -0.34
SUMO1-208ENST00000409627 C2orf83Q53S99 150 aa12.91□□□□□ -0.34
SUMO1-208ENST00000409627 HIST2H2BDQ6DRA6 164 aa12.91□□□□□ -0.34
SUMO1-208ENST00000409627 C11orf87Q6NUJ2 197 aa12.91□□□□□ -0.34
SUMO1-208ENST00000409627 SLC25A24Q6NUK1 477 aa12.91□□□□□ -0.34
SUMO1-208ENST00000409627 Q6ZNX1 250 aa12.91□□□□□ -0.34
SUMO1-208ENST00000409627 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
SUMO1-208ENST00000409627 K7EPK0 472 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 CORTO00230 105 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 SSSCA1O60232 199 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 CXCL3P19876 107 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 NPY1RP25929 384 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 DEFA5Q01523 94 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 NOXA1Q86UR1 476 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 OR11H7Q8NGC8 314 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 SPATA3Q8NHX4 192 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 C4orf3Q8WVX3 66 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 RAB40CQ96S21 281 aa12.9□□□□□ -0.34
SUMO1-208ENST00000409627 NDUFB8O95169 186 aa12.89□□□□□ -0.35
SUMO1-208ENST00000409627 IFNA10P01566 189 aa12.89□□□□□ -0.35
SUMO1-208ENST00000409627 RPP30P78346 268 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms