RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 PJVKQ0ZLH3 352 aa8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 PMS2P11Q13670 270 aa8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 BTNL8Q6UX41 500 aa8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 C16orf82Q7Z2V1 217 aa8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 TMEM170AQ8WVE7 144 aa8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 SRSF12Q8WXF0 261 aaKnown RBP8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 FOXC2Q99958 501 aa8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 C19orf24Q9BVV8 132 aa8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 FBXL15Q9H469 300 aa8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 FAM96BQ9Y3D0 163 aa8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.24□□□□□ -1.09
SNORD88C-201ENST00000408061 UBE2L5PA0A1B0GUS4 154 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 A0A1W2PRD5 423 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 A0A1W2PRF3 423 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 A0A1W2PRM7 423 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 MFSD2BA6NFX1 497 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 TSPAN15O95858 294 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 CNTFRP26992 372 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 RPL29P47914 159 aaKnown RBP8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 PRB3Q04118 309 aaPredicted RBP8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 WT1-ASQ06250 92 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 TUSC1Q2TAM9 212 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 ACOT6Q3I5F7 207 aaPredicted RBP8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 TMEM41BQ5BJD5 291 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 CYB5R2Q6BCY4 276 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 TREML4Q6UXN2 200 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 TMEM182Q6ZP80 229 aaPredicted RBP8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 Q6ZRG5 221 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 DYNAPQ8N1N2 210 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 PIP4P2Q8N4L2 257 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 OR10W1Q8NGF6 305 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 MBD3L1Q8WWY6 194 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 C22orf15Q8WYQ4 148 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 RBMXL1Q96E39 390 aaKnown RBP8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 SLC35E1Q96K37 410 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 P2RX4Q99571 388 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 RASL11BQ9BPW5 248 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 SH3BGRL3Q9H299 93 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 LSM4Q9Y4Z0 139 aaKnown RBP8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 F11RQ9Y624 299 aaKnown RBP8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 DOPEY2Q9Y3R5 2298 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 PTPN13Q12923 2485 aa8.23□□□□□ -1.09
SNORD88C-201ENST00000408061 TRAV40A0A0B4J280 105 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 A0A1B0GW64 132 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 NCBP2LA6PVI3 153 aaKnown RBP8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 NPIPB5A8MRT5 1133 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 TEX22C9J3V5 150 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 NDUFS6O75380 124 aaKnown RBP8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 TGFAP01135 160 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 OPN1MWP04001 364 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 CRYGCP07315 174 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 OPN1MW2P0DN77 364 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 OPN1MW3P0DN78 364 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 M6PRP20645 277 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 TAGLN2P37802 199 aaKnown RBP8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 SELENOTP62341 195 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 HNF4GQ14541 408 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 FXYD3Q14802 87 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 TMEM249Q2WGJ8 235 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 NANPQ8TBE9 248 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 CXorf58Q96LI9 332 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 FAM210AQ96ND0 272 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 RBM14Q96PK6 669 aaKnown RBP8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 CITED4Q96RK1 184 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 PBDC1Q9BVG4 233 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 NPCDR1Q9BY65 106 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 TPSG1Q9NRR2 321 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 PLA2G2EQ9NZK7 142 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 THYN1Q9P016 225 aa8.22□□□□□ -1.09
SNORD88C-201ENST00000408061 ABCA2Q9BZC7 2435 aa8.21□□□□□ -1.09
SNORD88C-201ENST00000408061 RNF223E7ERA6 249 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 E7EUB6 86 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 IGHV4-31P0DP07 118 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 MYOD1P15172 320 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 HIST1H1BP16401 226 aaKnown RBP8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 CTRB1P17538 263 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 CX3CL1P78423 397 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 RUNX1Q01196 453 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 ZNF616Q08AN1 781 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 KLK9Q2XQG4 91 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 ARSJQ5FYB0 599 aaPredicted RBP8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 CTRB2Q6GPI1 263 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 C9orf139Q6ZV77 190 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 TTC9CQ8N5M4 171 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 Q8N9W7 124 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 FAM213BQ8TBF2 198 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 ARPC1AQ92747 370 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 Q96MF0 132 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 RSG1Q9BU20 258 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 ACTR3CQ9C0K3 210 aaPredicted RBP8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 HRH4Q9H3N8 390 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 RPRMQ9NS64 109 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 KLK9Q9UKQ9 250 aa8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 PRRC2AP48634 2157 aaKnown RBP8.21□□□□□ -1.1
SNORD88C-201ENST00000408061 UTP20O75691 2785 aaKnown RBP8.2□□□□□ -1.1
SNORD88C-201ENST00000408061 CTXND1A0A1B0GTU2 59 aa8.2□□□□□ -1.1
SNORD88C-201ENST00000408061 SMCO3A2RU48 225 aa8.2□□□□□ -1.1
SNORD88C-201ENST00000408061 FCN1O00602 326 aa8.2□□□□□ -1.1
SNORD88C-201ENST00000408061 PPT1P50897 306 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms