RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 CBLN2Q8IUK8 224 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 MMD2Q8IY49 270 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 CYB561D1Q8N8Q1 229 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 CACNG8Q8WXS5 425 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 SIRT7Q9NRC8 400 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 DPM3Q9P2X0 92 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 SIGLEC9Q9Y336 463 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 MED13LQ71F56 2210 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 ZFP92A6NM28 416 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 EIF3GO75821 320 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLIP4-203ENST00000401617 PRR20EP86478 221 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 PRR20CP86479 221 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 PRR20DP86480 221 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 PRR20BP86481 221 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 PRR20AP86496 221 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 CD69Q07108 199 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 AWAT1Q58HT5 328 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 GCSAMLQ5JQS6 135 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 C10orf55Q5SWW7 151 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 MIC13Q5XKP0 118 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 RBMS3Q6XE24 437 aaKnown RBP9.85□□□□□ -0.83
CLIP4-203ENST00000401617 SLC45A2Q9UMX9 530 aa9.85□□□□□ -0.83
CLIP4-203ENST00000401617 C7orf77A4D0Y5 90 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 LINC00869P0C866 280 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 CNTFRP26992 372 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 RAB31Q13636 194 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 GAMTQ14353 236 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 FAM90A2PQ658T7 463 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 CFHR4Q92496 578 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 TMPRSS5Q9H3S3 457 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 IGKV1OR2-108A0A075B7D4 117 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 IGLC7A0M8Q6 106 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 HMGB3O15347 200 aaKnown RBP9.84□□□□□ -0.83
CLIP4-203ENST00000401617 LMO4P61968 165 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 RHEBQ15382 184 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 SLC35E3Q7Z769 313 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 RNASEH2CQ8TDP1 164 aaKnown RBP9.84□□□□□ -0.83
CLIP4-203ENST00000401617 MANBALQ9NQG1 85 aa9.84□□□□□ -0.83
CLIP4-203ENST00000401617 USP9XQ93008 2570 aaPredicted RBP9.83□□□□□ -0.84
CLIP4-203ENST00000401617 H3BQ15 152 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 VENTXO95231 258 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 DEFA4P12838 97 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 PAX6P26367 422 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 CEACAM3P40198 252 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 COMPP49747 757 aaPredicted RBP9.83□□□□□ -0.84
CLIP4-203ENST00000401617 CD81P60033 236 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 B2MP61769 119 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 KLRD1Q13241 179 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 STPG3Q8N7X2 389 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 ZNF114Q8NC26 417 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 SIRPDQ9H106 197 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 SMCO4Q9NRQ5 59 aa9.83□□□□□ -0.84
CLIP4-203ENST00000401617 TIMM23O14925 209 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 RPL27AP46776 148 aaKnown RBP9.82□□□□□ -0.84
CLIP4-203ENST00000401617 PSMB3P49720 205 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 SUB1P53999 127 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLIP4-203ENST00000401617 MLANAQ16655 118 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 PPP1R27Q86WC6 154 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 SSMEM1Q8WWF3 244 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 SPOCK3Q9BQ16 436 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 TUBA4BQ9H853 241 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 KLF2Q9Y5W3 355 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-203ENST00000401617 TACC2O95359 2948 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 IGHV2-70DA0A0C4DH43 119 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 M0R036 132 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 IGHV4-39P01824 125 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 SNRNP70P08621 437 aaKnown RBP9.82□□□□□ -0.84
CLIP4-203ENST00000401617 STAG3L2P0CL84 134 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 STAG3L3P0CL85 134 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 RNF224P0DH78 156 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 SSBP2P81877 361 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-203ENST00000401617 MEF2BQ02080 365 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-203ENST00000401617 SLC16A13Q7RTY0 426 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 VMO1Q7Z5L0 202 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 BBC3Q96PG8 261 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-203ENST00000401617 RPS10P5Q9NQ39 176 aa9.82□□□□□ -0.84
CLIP4-203ENST00000401617 METTL1Q9UBP6 276 aaKnown RBP9.82□□□□□ -0.84
CLIP4-203ENST00000401617 PUS1Q9Y606 427 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLIP4-203ENST00000401617 LOC105371267A0A1B0GV96 52 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 A0A1W2PPV4 95 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 OOSP1A8MZH6 123 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 TMEM250H0YL14 139 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 HOXB4P17483 251 aaPredicted RBP9.81□□□□□ -0.84
CLIP4-203ENST00000401617 MINOS1Q5TGZ0 78 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 LHFPL4Q7Z7J7 247 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 MRPL41Q8IXM3 137 aaKnown RBP9.81□□□□□ -0.84
CLIP4-203ENST00000401617 BPESC1Q9GZL8 116 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 FNDC4Q9H6D8 234 aaPredicted RBP9.81□□□□□ -0.84
CLIP4-203ENST00000401617 MINOS1-NBL1R4GNA1 71 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 FLNCQ14315 2725 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 TEX22C9J3V5 150 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 CRYGCP07315 174 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 TNXAQ16473 311 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 NPBQ8NG41 125 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 GATAD1Q8WUU5 269 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 TVP23CQ96ET8 276 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 SLC35E1Q96K37 410 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 NIPSNAP3BQ9BS92 247 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 C20orf24Q9BUV8 137 aa9.81□□□□□ -0.84
CLIP4-203ENST00000401617 FBXL15Q9H469 300 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms