RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 C17orf100A8MU93 164 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 SRSF1Q07955 248 aaKnown RBP eCLIP7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 Q5BKY6 102 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 RNASE6Q93091 150 aaKnown RBP7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 C5orf30Q96GV9 206 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 TMEM160Q9NX00 188 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 F11RQ9Y624 299 aaKnown RBP7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 CGB1A6NKQ9 187 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 FOXA2Q9Y261 457 aaPredicted RBP7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 ZNF257Q9Y2Q1 563 aa7.02□□□□□ -1.29
SPTLC3-201ENST00000399002 UBE2CO00762 179 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 OVOL1O14753 267 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 LEAP2Q969E1 77 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 MS4A6AQ9H2W1 248 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 EPOPA6NHQ4 379 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 PF4P02776 101 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 CRYBA2P53672 197 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 EMP1P54849 157 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 FAM71F2Q6NXP2 309 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 C1QL2Q7Z5L3 287 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 SIGLEC12Q96PQ1 595 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 AGMATQ9BSE5 352 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 SAA2-SAA4A0A096LPE2 208 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 IL18BPO95998 194 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 SAA2P0DJI9 122 aaPredicted RBP7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 SUMO2P61956 95 aaKnown RBP7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 MIR17HGQ75NE6 70 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 JMJD8Q96S16 334 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 RNF126Q9BV68 326 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 ST20Q9HBF5 79 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 IGKV3D-15A0A087WSY6 115 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 FABP5P3A8MUU1 101 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 FHITP49789 147 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 NUDT10Q8NFP7 164 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 FLVCR1-AS1Q8TAF5 88 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 PTPRFP10586 1907 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 TRAV24A0A0B4J272 114 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 TRAV21A0A0B4J279 112 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 SHISA3A0PJX4 238 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 PGPEP1LA6NFU8 196 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 OOSP1A8MZH6 123 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 TIAF1O95411 115 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 SAA1P0DJI8 122 aaPredicted RBP7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 CTAG1AP78358 180 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 BSPH1Q075Z2 132 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 MORN2Q502X0 79 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 GCSAMLQ5JQS6 135 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 PEAR1Q5VY43 1037 aaPredicted RBP7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 DTX1Q86Y01 620 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 DUX3Q96PT4 197 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 FOXC2Q99958 501 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 EPDR1Q9UM22 224 aa7.01□□□□□ -1.29
SPTLC3-201ENST00000399002 TRBV6-6A0A0A6YYG2 114 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 A0A1B0GV90 55 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 CTSBP07858 339 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 GPR183P32249 361 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 LYZL4Q96KX0 146 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 MSGN1A6NI15 193 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 TGFBR3LH3BV60 316 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 HBDP02042 147 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 ATP5G3P48201 142 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 NIT1Q86X76 327 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 C8orf46Q8TAG6 207 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 WNT10AQ9GZT5 417 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 GSN-AS1Q9NRJ2 163 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 IGKV1D-43A0A0B4J1Z2 117 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 C9JCJ5 164 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 RFPL3SP0C7P2 107 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 CNTFRP26992 372 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 TMEM170BQ5T4T1 132 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 ZNF600Q6ZNG1 722 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 ZNRF1Q8ND25 227 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 FDCSPQ8NFU4 85 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 OR5AN1Q8NGI8 311 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 TMEM133Q9H2Q1 129 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 FNDC10F2Z333 226 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 LY6EQ16553 131 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 PLPPR1Q8TBJ4 325 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 WBP1Q96G27 269 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 NUDT11Q96G61 164 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 PRDM13Q9H4Q3 707 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 DPM2O94777 84 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 PSG7Q13046 419 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 FAM168AQ92567 244 aa7□□□□□ -1.29
SPTLC3-201ENST00000399002 PDCD11Q14690 1871 aaKnown RBP6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 ADMP35318 185 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 ID3Q02535 119 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 FAM74A4Q5TZK3 123 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 TSKUQ8WUA8 353 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 FBXL15Q9H469 300 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 COLQQ9Y215 455 aaPredicted RBP6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 NUMA1Q14980 2115 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 TRAV9-2A0A087WT02 112 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 TMEM262E9PQX1 116 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 UMODP07911 640 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 CRYGSP22914 178 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 RNASE4P34096 147 aaKnown RBP6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 VDAC2P45880 294 aaPredicted RBP6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 SRSF4Q08170 494 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms