RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 FOSL1P15407 271 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 NPPCP23582 126 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 RPS20P60866 119 aaKnown RBP11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 LCN2P80188 198 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 TMEM97Q5BJF2 176 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 RNFT1Q5M7Z0 435 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 DGAT2L7PQ6IED9 249 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 GOLT1AQ6ZVE7 132 aa11.85□□□□□ -0.51
PCDHGA11-201ENST00000398587 USF3Q68DE3 2245 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 WISP1O95388 367 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 RELQ04864 619 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 Q6ZS49 121 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 TBX15Q96SF7 602 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 HSPB9Q9BQS6 159 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 PROK2Q9HC23 129 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 DOPEY2Q9Y3R5 2298 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 TM4SF20Q53R12 229 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 ATRAIDQ6UW56 229 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 GPR61Q9BZJ8 451 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 NUP210Q8TEM1 1887 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 MGPP08493 103 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 TRGC1P0CF51 173 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 COLCA1Q6ZS62 124 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 SGK494Q96LW2 274 aa11.84□□□□□ -0.51
PCDHGA11-201ENST00000398587 TRBV9A0A0B4J1U6 114 aa11.83□□□□□ -0.51
PCDHGA11-201ENST00000398587 LILRA1O75019 489 aa11.83□□□□□ -0.51
PCDHGA11-201ENST00000398587 HTN1P15515 57 aa11.83□□□□□ -0.51
PCDHGA11-201ENST00000398587 CDX1P47902 265 aaPredicted RBP11.83□□□□□ -0.51
PCDHGA11-201ENST00000398587 EBLN2Q6P2I7 272 aa11.83□□□□□ -0.51
PCDHGA11-201ENST00000398587 SRSF12Q8WXF0 261 aaKnown RBP11.83□□□□□ -0.51
PCDHGA11-201ENST00000398587 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.51
PCDHGA11-201ENST00000398587 AMY1AP04745 511 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 TWIST1Q15672 202 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 WDR83OSQ9Y284 106 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 GCGP01275 180 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 CD55P08174 381 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 SMUG1Q53HV7 270 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 NMSQ5H8A3 153 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 C21orf62Q9NYP8 219 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 SDF2L1Q9HCN8 221 aa11.83□□□□□ -0.52
PCDHGA11-201ENST00000398587 A0A087WWC5 75 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 MAS1LP35410 378 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 OR52E5Q8NH55 327 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 TNFRSF14Q92956 283 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 PGLYRP4Q96LB8 373 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 WFDC1Q9HC57 220 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 SELLP14151 372 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 Q6P435 159 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 OR8A1Q8NGG7 326 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 LRRK1Q38SD2 2015 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 IGHV3OR16-10A0A075B7F0 116 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 J3QR89 54 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 OR9G9P0C7N8 305 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 ATP5G3P48201 142 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 PRCDQ00LT1 54 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 HEPN1Q6WQI6 88 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 FAM169BQ8N8A8 192 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 IGKV3-15P01624 115 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 TFPI2P48307 235 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 SRSF4Q08170 494 aaKnown RBP11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 SAPCD1Q5SSQ6 148 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 MYOZ3Q8TDC0 251 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 FAM168AQ92567 244 aa11.82□□□□□ -0.52
PCDHGA11-201ENST00000398587 LYNX1G3V0Z9 82 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 LYNX1P0DP58 116 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 CKS2P33552 79 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 CDKN1AP38936 164 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 ICAM4Q14773 271 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 PPP1R27Q86WC6 154 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 ARPC1AQ92747 370 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 TUBA4BQ9H853 241 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 CYTL1Q9NRR1 136 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 FBXL7Q9UJT9 491 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 PLXND1Q9Y4D7 1925 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 GATA2P23769 480 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 MIR17HGQ75NE6 70 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 CD177Q8N6Q3 437 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 ZFHX2Q9C0A1 2572 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 NBR2O15453 112 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 TEX45Q8NA69 505 aa11.81□□□□□ -0.52
PCDHGA11-201ENST00000398587 SCO2A0A1W2PP80 73 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 CGB1A6NKQ9 187 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 SRIP30626 198 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 DLX6P56179 175 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 CD69Q07108 199 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 FOXA2Q9Y261 457 aaPredicted RBP11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 ABCA1O95477 2261 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 M0QZK8 103 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 GGCTO75223 188 aaKnown RBP11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 CD99P14209 185 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 MBD3L1Q8WWY6 194 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 WFIKKN1Q96NZ8 548 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 WNT10AQ9GZT5 417 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 PEX7O00628 323 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 G0S2P27469 103 aa11.8□□□□□ -0.52
PCDHGA11-201ENST00000398587 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms