RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 FOLR2P14207 255 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 AKR1C2P52895 323 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 PRCDQ00LT1 54 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 C19orf35Q6ZS72 473 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 FAM219AQ8IW50 185 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 Q8N1Y9 231 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 OR13C8Q8NGS7 320 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 MRGPRFQ96AM1 343 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 RRNAD1Q96FB5 475 aaKnown RBP10.58□□□□□ -0.72
SEC13-204ENST00000397099 PDCD10Q9BUL8 212 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 PLEKHA3Q9HB20 300 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 ZC4H2Q9NQZ6 224 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 SCP2D1Q9UJQ7 156 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 NSG2Q9Y328 171 aa10.58□□□□□ -0.72
SEC13-204ENST00000397099 ZNF320A2RRD8 509 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 FABP12A6NFH5 140 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 INS-IGF2F8WCM5 200 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 ZNF701M0R085 212 aaPredicted RBP10.57□□□□□ -0.72
SEC13-204ENST00000397099 TGOLN2O43493 480 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 IGKV1-39P01597 117 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 IGKV1D-39P04432 117 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 IGHV4-30-4P0DP06 118 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 CBLN1P23435 193 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 UCP1P25874 307 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 GPR183P32249 361 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 PPP5CP53041 499 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 TRIM16LQ309B1 348 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 DEFB114Q30KQ6 69 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 ANKRD55Q3KP44 614 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 OR4D10Q8NGI6 311 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 MCFD2Q8NI22 146 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 DEDD2Q8WXF8 326 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 TXN2Q99757 166 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 ZNF436Q9C0F3 470 aaPredicted RBP10.57□□□□□ -0.72
SEC13-204ENST00000397099 NXF2Q9GZY0 626 aaKnown RBP10.57□□□□□ -0.72
SEC13-204ENST00000397099 C21orf62Q9NYP8 219 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 MRPL27Q9P0M9 148 aaKnown RBP10.57□□□□□ -0.72
SEC13-204ENST00000397099 NBEAL2Q6ZNJ1 2754 aa10.57□□□□□ -0.72
SEC13-204ENST00000397099 TRAV25A0A0B4J276 109 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 ANKRD20A5PA0PJZ0 165 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 CORTO00230 105 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 IGHV3-23P01764 117 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 HLA-AP01891 365 aaKnown RBP10.56□□□□□ -0.72
SEC13-204ENST00000397099 PI3P19957 117 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 FCGR2BP31994 310 aaPredicted RBP10.56□□□□□ -0.72
SEC13-204ENST00000397099 FAUP35544 74 aaKnown RBP10.56□□□□□ -0.72
SEC13-204ENST00000397099 SUB1P53999 127 aaKnown RBP eCLIP10.56□□□□□ -0.72
SEC13-204ENST00000397099 AP3S2P59780 193 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 DHODHQ02127 395 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 RELQ04864 619 aaPredicted RBP10.56□□□□□ -0.72
SEC13-204ENST00000397099 CD300EQ496F6 205 aaPredicted RBP10.56□□□□□ -0.72
SEC13-204ENST00000397099 HAPLN4Q86UW8 402 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 OR2C3Q8N628 320 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 MARCH1Q8TCQ1 289 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 TP53RKQ96S44 253 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 THAP7Q9BT49 309 aaPredicted RBP10.56□□□□□ -0.72
SEC13-204ENST00000397099 TUBA4BQ9H853 241 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 C19orf73Q9NVV2 129 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 KCNIP3Q9Y2W7 256 aa10.56□□□□□ -0.72
SEC13-204ENST00000397099 DNAH7Q8WXX0 4024 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 TEX13DA0A0J9YY54 714 aaPredicted RBP10.55□□□□□ -0.72
SEC13-204ENST00000397099 TMEM213A2RRL7 107 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 NDUFA4O00483 81 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 CDS2O95674 445 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 P0C879 139 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 TNFSF8P32971 234 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 S100A5P33763 92 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 SNCAP37840 140 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 ZNF57Q68EA5 555 aaPredicted RBP10.55□□□□□ -0.72
SEC13-204ENST00000397099 SLC16A13Q7RTY0 426 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 SBSPONQ8IVN8 264 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 SLC35G3Q8N808 338 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 OR4C16Q8NGL9 310 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 RNASE11Q8TAA1 199 aaKnown RBP10.55□□□□□ -0.72
SEC13-204ENST00000397099 SCARB1Q8WTV0 552 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 SOSTQ9BQB4 213 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 TMEM222Q9H0R3 208 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
SEC13-204ENST00000397099 CEPT1Q9Y6K0 416 aa10.55□□□□□ -0.72
SEC13-204ENST00000397099 CCDC160A6NGH7 325 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 DBX1A6NMT0 343 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 K7EMT4 169 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 NUPL2O15504 423 aaKnown RBP10.54□□□□□ -0.72
SEC13-204ENST00000397099 IFNA17P01571 189 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 C8orf88P0DMB2 117 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 MFAP4P55083 255 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 ADAMTSL5Q6ZMM2 481 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 RBPMSQ93062 196 aaKnown RBP10.54□□□□□ -0.72
SEC13-204ENST00000397099 NAA60Q9H7X0 242 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 ENY2Q9NPA8 101 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 GPR132Q9UNW8 380 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 S4R3C0 116 aa10.54□□□□□ -0.72
SEC13-204ENST00000397099 HUWE1Q7Z6Z7 4374 aaKnown RBP10.54□□□□□ -0.72
SEC13-204ENST00000397099 OR2T8A6NH00 312 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 K7EIM0 57 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 SCGB2A1O75556 95 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 CD81P60033 236 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 Q56UQ5 140 aa10.53□□□□□ -0.72
SEC13-204ENST00000397099 UXS1Q8NBZ7 420 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms