RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 SHPKQ9UHJ6 478 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 VWFP04275 2813 aa11.61□□□□□ -0.55
IGHV3-53-201ENST00000390627 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 ANKRD34BA5PLL1 514 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 G3V4G9 280 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 ST8SIA3O43173 380 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 SFT2D2O95562 160 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 ERHP84090 104 aaKnown RBP11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 PPP1R1AQ13522 171 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 OXLD1Q5BKU9 147 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 EEF1AKMT3Q96AZ1 226 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 PRR13Q9NZ81 148 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 CACFD1Q9UGQ2 172 aa11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 F11RQ9Y624 299 aaKnown RBP11.6□□□□□ -0.55
IGHV3-53-201ENST00000390627 FBN3Q75N90 2809 aa11.59□□□□□ -0.55
IGHV3-53-201ENST00000390627 NDUFB8O95169 186 aa11.59□□□□□ -0.55
IGHV3-53-201ENST00000390627 SLURP1P55000 103 aa11.59□□□□□ -0.55
IGHV3-53-201ENST00000390627 SLC25A24Q6NUK1 477 aa11.59□□□□□ -0.55
IGHV3-53-201ENST00000390627 C1QL4Q86Z23 238 aa11.59□□□□□ -0.55
IGHV3-53-201ENST00000390627 OR2C3Q8N628 320 aa11.59□□□□□ -0.55
IGHV3-53-201ENST00000390627 GPR146Q96CH1 333 aa11.59□□□□□ -0.55
IGHV3-53-201ENST00000390627 ENY2Q9NPA8 101 aa11.59□□□□□ -0.55
IGHV3-53-201ENST00000390627 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 INS-IGF2F8WCM5 200 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 OVOL1O14753 267 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 UPK1BO75841 260 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 SULT1A3P0DMM9 295 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 SULT1A4P0DMN0 295 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 HOXD3P31249 432 aaPredicted RBP11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 HOXA1P49639 335 aaPredicted RBP11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 SPCS3P61009 180 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 BEAN1Q3B7T3 259 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 AARDQ4LEZ3 155 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 NMSQ5H8A3 153 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 MZT2BQ6NZ67 158 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 Q6ZRM9 215 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 LYZL2Q7Z4W2 148 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 LRTM2Q8N967 370 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 ZNF114Q8NC26 417 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 OR1P1Q8NH06 330 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 OR52E5Q8NH55 327 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 DCUN1D4Q92564 292 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 C20orf85Q9H1P6 137 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 FLVCR2Q9UPI3 526 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 PKD1L1Q8TDX9 2849 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 NOTCH3Q9UM47 2321 aa11.58□□□□□ -0.56
IGHV3-53-201ENST00000390627 TRBV7-1A0A0A6YYK4 115 aa11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 TRBV12-3P01733 135 aa11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 HLA-AP01891 365 aaKnown RBP11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 RPEL1Q2QD12 228 aa11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 ANKRD55Q3KP44 614 aa11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 SPINK9Q5DT21 86 aa11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 KPRPQ5T749 579 aaPredicted RBP11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 C9orf66Q5T8R8 295 aa11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 DLX4Q92988 240 aaPredicted RBP11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 DMRT1Q9Y5R6 373 aa11.57□□□□□ -0.56
IGHV3-53-201ENST00000390627 C9orf170A2RU37 121 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 SEC14L6B5MCN3 397 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 TCRBP04435 133 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 OR4E1P0C645 316 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 ANXA7P20073 488 aaKnown RBP11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 SNCAP37840 140 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 ASAH1Q13510 395 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 SMCO1Q147U7 214 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 TATDN3Q17R31 274 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 C4orf46Q504U0 113 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 PDLIM3Q53GG5 364 aaPredicted RBP11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 LYG2Q86SG7 212 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 COQ8AQ8NI60 647 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 VN1R17PQ8TDU5 208 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 TBC1D24Q9ULP9 559 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 TMED3Q9Y3Q3 217 aa11.56□□□□□ -0.56
IGHV3-53-201ENST00000390627 A0A1B0GU03 582 aa11.55□□□□□ -0.56
IGHV3-53-201ENST00000390627 FAM240BA0A1B0GVZ2 78 aa11.55□□□□□ -0.56
IGHV3-53-201ENST00000390627 MFSD2BA6NFX1 497 aa11.55□□□□□ -0.56
IGHV3-53-201ENST00000390627 IGHV3-23P01764 117 aa11.55□□□□□ -0.56
IGHV3-53-201ENST00000390627 SUB1P53999 127 aaKnown RBP eCLIP11.55□□□□□ -0.56
IGHV3-53-201ENST00000390627 MFAP2P55001 183 aa11.55□□□□□ -0.56
IGHV3-53-201ENST00000390627 DHRS2Q13268 280 aa11.55□□□□□ -0.56
IGHV3-53-201ENST00000390627 CCDC140Q96MF4 163 aa11.55□□□□□ -0.56
IGHV3-53-201ENST00000390627 S4R3C0 116 aa11.55□□□□□ -0.56
IGHV3-53-201ENST00000390627 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 CORTO00230 105 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 BMPR1BO00238 502 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 WIPF1O43516 503 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 GGCTO75223 188 aaKnown RBP11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 SLC25A6P12236 298 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 ARL3P36405 182 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 INSL3P51460 131 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 DEFA6Q01524 100 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 KLF5Q13887 457 aaPredicted RBP11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 CLEC19AQ6UXS0 136 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 OR1S1Q8NH92 325 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 ZNF502Q8TBZ5 544 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 MISP3Q96FF7 219 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 ELOVL1Q9BW60 279 aa11.54□□□□□ -0.56
IGHV3-53-201ENST00000390627 NUDT15Q9NV35 164 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms