RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 C15orf61A6NNL5 157 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 EIF3GO75821 320 aaKnown RBP eCLIP8.54□□□□□ -1.04
PKP4-201ENST00000389757 CD8AP01732 235 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 RNF224P0DH78 156 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 SMUG1Q53HV7 270 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 NHLRC3Q5JS37 347 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 MINOS1Q5TGZ0 78 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 NR2C2APQ86WQ0 139 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 MINOS1-NBL1R4GNA1 71 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 OOSP1A8MZH6 123 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 NBEAP1P0C6P0 100 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 CD99P14209 185 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 HNRNPA3P51991 378 aaKnown RBP8.54□□□□□ -1.04
PKP4-201ENST00000389757 RELBQ01201 579 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 NEUROG1Q92886 237 aa8.54□□□□□ -1.04
PKP4-201ENST00000389757 TRAF4Q9BUZ4 470 aaPredicted RBP8.54□□□□□ -1.04
PKP4-201ENST00000389757 E7EQL1 145 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 F12P00748 615 aaPredicted RBP8.53□□□□□ -1.04
PKP4-201ENST00000389757 ZNF250P15622 560 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 DUTP33316 252 aaKnown RBP8.53□□□□□ -1.04
PKP4-201ENST00000389757 RHOGP84095 191 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 SAMD13Q5VXD3 122 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 OR9G9P0C7N8 305 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 GPX4P36969 197 aaPredicted RBP8.53□□□□□ -1.04
PKP4-201ENST00000389757 CBLN2Q8IUK8 224 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 SGK494Q96LW2 274 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 ROS1P08922 2347 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 POLEQ07864 2286 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 TRAV20A0A0B4J274 112 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 CKS2P33552 79 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 CD81P60033 236 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 SNRPEP62304 92 aaKnown RBP8.53□□□□□ -1.04
PKP4-201ENST00000389757 FOXL2NBQ6ZUU3 175 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 CD177Q8N6Q3 437 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 KIF26BQ2KJY2 2108 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 IGKV1-27A0A075B6S5 117 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 M0R1W7 72 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 NDUFS8O00217 210 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 ZNF324BQ6AW86 544 aaPredicted RBP8.53□□□□□ -1.04
PKP4-201ENST00000389757 ZNF841Q6ZN19 808 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 RPRMLQ8N4K4 120 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 BPESC1Q9GZL8 116 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 HSPB8Q9UJY1 196 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 PLXNA4Q9HCM2 1894 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 ABCA4P78363 2273 aa8.53□□□□□ -1.04
PKP4-201ENST00000389757 DANCRP0C864 163 aa8.52□□□□□ -1.04
PKP4-201ENST00000389757 C2orf68Q2NKX9 166 aa8.52□□□□□ -1.04
PKP4-201ENST00000389757 LOC389332A0A1B0GUA5 103 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 PSPNO60542 156 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 GCGP01275 180 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 NMBP08949 121 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 TRGC1P0CF51 173 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 SCGB1C2P0DMR2 95 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 EGR1P18146 543 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 LINC01356Q8N9X3 169 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 MUC6Q6W4X9 2439 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 A0A0A6YYD4 124 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 MT-ND6P03923 174 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 COL8A2P25067 703 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 C11orf44Q8N8P7 122 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 HIST1H2BAQ96A08 127 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 SDHCQ99643 169 aaPredicted RBP8.52□□□□□ -1.05
PKP4-201ENST00000389757 A6NNC1 897 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 HLA-DRB1P01911 266 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 CEACAM8P31997 349 aaPredicted RBP8.52□□□□□ -1.05
PKP4-201ENST00000389757 KLRD1Q13241 179 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 TMEM183BQ1AE95 376 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 ZNF525Q8N782 197 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 GSX1Q9H4S2 264 aaPredicted RBP8.52□□□□□ -1.05
PKP4-201ENST00000389757 FRMPD3Q5JV73 1810 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 ZFHX2Q9C0A1 2572 aaPredicted RBP8.52□□□□□ -1.05
PKP4-201ENST00000389757 LY6HO94772 140 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 AREGP15514 252 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 C19orf54Q5BKX5 351 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 TPTE2P1Q5T6R2 138 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 SCGB1D4Q6XE38 83 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 OR8A1Q8NGG7 326 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 OR52E5Q8NH55 327 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 PGLYRP4Q96LB8 373 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 NLRC5Q86WI3 1866 aa8.52□□□□□ -1.05
PKP4-201ENST00000389757 SNRNP200O75643 2136 aaKnown RBP8.52□□□□□ -1.05
PKP4-201ENST00000389757 TRAV41A0A0B4J266 112 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 RAMP3O60896 148 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 TFF3Q07654 80 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 SRSF7Q16629 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
PKP4-201ENST00000389757 TMEM155Q4W5P6 130 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 ETV2O00321 342 aaPredicted RBP8.51□□□□□ -1.05
PKP4-201ENST00000389757 FAM3BP58499 235 aaPredicted RBP8.51□□□□□ -1.05
PKP4-201ENST00000389757 HGFACQ04756 655 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 TMEM42Q69YG0 159 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 PVRIGQ6DKI7 326 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 BRD3OSQ6XYD6 125 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 TMEM144Q7Z5S9 345 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 LILRA1O75019 489 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 CEACAM4O75871 244 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 RPL13AP40429 203 aaKnown RBP8.51□□□□□ -1.05
PKP4-201ENST00000389757 NSUN5P1Q3KNT7 163 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 ZNF600Q6ZNG1 722 aa8.51□□□□□ -1.05
PKP4-201ENST00000389757 GAFA1Q96PS6 74 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms