RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CDC42EP3Q9UKI2 254 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 KLF13Q9Y2Y9 288 aaPredicted RBP11.47□□□□□ -0.57
SDC1-202ENST00000381150 PKDREJQ9NTG1 2253 aa11.46□□□□□ -0.57
SDC1-202ENST00000381150 hDV102S1A0JD36 115 aa11.46□□□□□ -0.57
SDC1-202ENST00000381150 STAG3L2P0CL84 134 aa11.46□□□□□ -0.57
SDC1-202ENST00000381150 STAG3L3P0CL85 134 aa11.46□□□□□ -0.57
SDC1-202ENST00000381150 MYOD1P15172 320 aa11.46□□□□□ -0.57
SDC1-202ENST00000381150 CA7P43166 264 aa11.46□□□□□ -0.57
SDC1-202ENST00000381150 GPR12P47775 334 aa11.46□□□□□ -0.57
SDC1-202ENST00000381150 C5orf30Q96GV9 206 aa11.46□□□□□ -0.57
SDC1-202ENST00000381150 GP6Q9HCN6 339 aa11.46□□□□□ -0.57
SDC1-202ENST00000381150 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.46□□□□□ -0.58
SDC1-202ENST00000381150 HAND1O96004 215 aa11.46□□□□□ -0.58
SDC1-202ENST00000381150 RHOBP62745 196 aa11.46□□□□□ -0.58
SDC1-202ENST00000381150 Q0VG73 95 aa11.46□□□□□ -0.58
SDC1-202ENST00000381150 SLAQ13239 276 aa11.46□□□□□ -0.58
SDC1-202ENST00000381150 EFNB3Q15768 340 aa11.46□□□□□ -0.58
SDC1-202ENST00000381150 ZNF497Q6ZNH5 498 aa11.46□□□□□ -0.58
SDC1-202ENST00000381150 MOB3BQ86TA1 216 aa11.46□□□□□ -0.58
SDC1-202ENST00000381150 Q8N976 141 aa11.46□□□□□ -0.58
SDC1-202ENST00000381150 BCL2L2Q92843 193 aaPredicted RBP11.46□□□□□ -0.58
SDC1-202ENST00000381150 NAA38Q9BRA0 125 aaKnown RBP11.46□□□□□ -0.58
SDC1-202ENST00000381150 ENY2Q9NPA8 101 aa11.46□□□□□ -0.58
SDC1-202ENST00000381150 EP300Q09472 2414 aaPredicted RBP11.45□□□□□ -0.58
SDC1-202ENST00000381150 IGHV2OR16-5A0A0B4J2B6 119 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 KLRC4-KLRK1H3BQV0 150 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 J3QT63 122 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 IGHV3-48P01763 117 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 ARR3P36575 388 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 SMIM15Q7Z3B0 74 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 NIT1Q86X76 327 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 FER1L6-AS2Q96M78 137 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 RTL8AQ9BWD3 113 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 V9GYV3 84 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 TNCP24821 2201 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 IGFBP2P18065 325 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 CTRLP40313 264 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 RAB31Q13636 194 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 SRSF7Q16629 238 aaKnown RBP eCLIP11.45□□□□□ -0.58
SDC1-202ENST00000381150 Q6P435 159 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 WDR73Q6P4I2 378 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 MRPL52Q86TS9 123 aaKnown RBP11.45□□□□□ -0.58
SDC1-202ENST00000381150 FAM168AQ92567 244 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 TMEM30CPA0ZSE6 113 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 ITGB1BP1O14713 200 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 CDKN1BP46527 198 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 GABRA6Q16445 453 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 KIR3DL3Q8N743 410 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 GNB1LQ9BYB4 327 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 SPRR3Q9UBC9 169 aa11.45□□□□□ -0.58
SDC1-202ENST00000381150 SPENQ96T58 3664 aaKnown RBP11.44□□□□□ -0.58
SDC1-202ENST00000381150 OR5B21A6NL26 309 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 CSN3P07498 182 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 UQCRFS1P47985 274 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 ZNF137PP52743 207 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 RPL39P5Q59GN2 51 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 TMEM136Q6ZRR5 245 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 AHRRA9YTQ3 701 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 MOB1BQ7L9L4 216 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 LHFPL4Q7Z7J7 247 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 DEFB127Q9H1M4 99 aa11.44□□□□□ -0.58
SDC1-202ENST00000381150 BRWD1-AS2P59051 145 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 TAAR6Q96RI8 345 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 MUC21A0A0G2JKD1 596 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 MUC21A0A140T8X8 626 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 CELA3BP08861 270 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 SELENOVP59797 346 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 MUC21Q5SSG8 566 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 TEPPQ6URK8 271 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 SSX8Q7RTT4 187 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 OR5B3Q8NH48 314 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 SFXN3Q9BWM7 321 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 CST9LQ9H4G1 147 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 MPC1Q9Y5U8 109 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 ZNF891A8MT65 544 aaPredicted RBP11.43□□□□□ -0.58
SDC1-202ENST00000381150 AMY1AP04745 511 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 UBE2G1P62253 170 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 CX3CL1P78423 397 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 EBLN2Q6P2I7 272 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 POLDIP2Q9Y2S7 368 aa11.43□□□□□ -0.58
SDC1-202ENST00000381150 PLCE1Q9P212 2302 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 TRAV9-2A0A087WT02 112 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 OR4C46A6NHA9 309 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 HSBP1L1C9JCN9 74 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 PLAUP00749 431 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 OPRK1P41145 380 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 WDR86Q86TI4 376 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 NPVFQ9HCQ7 196 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 IL19Q9UHD0 177 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 CD46P15529 392 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 OR13A1Q8NGR1 328 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 CACNA1BQ00975 2339 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 NBASA2RRP1 2371 aa11.42□□□□□ -0.58
SDC1-202ENST00000381150 TOX4O94842 621 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 HLA-DQA1P01909 254 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 MT-ND6P03923 174 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 MLANAQ16655 118 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 MDP1Q86V88 176 aa11.41□□□□□ -0.58
SDC1-202ENST00000381150 WFDC8Q8IUA0 241 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms