RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 C4orf46Q504U0 113 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 PDLIM3Q53GG5 364 aaPredicted RBP10.25□□□□□ -0.77
CKAP2-202ENST00000378034 ZNF343Q6P1L6 599 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 LYZL2Q7Z4W2 148 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 OR11H1Q8NG94 326 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 OR1N2Q8NGR9 330 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 COQ8AQ8NI60 647 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 FANCD2OSQ96PS1 177 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 CACNG5Q9UF02 275 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 TMED3Q9Y3Q3 217 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 F11RQ9Y624 299 aaKnown RBP10.25□□□□□ -0.77
CKAP2-202ENST00000378034 IGLV11-55A0A075B6I3 123 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 A0A1B0GU03 582 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 DUS4LO95620 317 aaKnown RBP10.25□□□□□ -0.77
CKAP2-202ENST00000378034 IGHV3-11P01762 117 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 HSPB1P04792 205 aaKnown RBP10.25□□□□□ -0.77
CKAP2-202ENST00000378034 OR8U8P0C7N1 319 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 SLC25A6P12236 298 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 ERHP84090 104 aaKnown RBP10.25□□□□□ -0.77
CKAP2-202ENST00000378034 ZNF616Q08AN1 781 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 SMCO1Q147U7 214 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 DEFB136Q30KP8 78 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 OR2C3Q8N628 320 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 LINC00482Q8N8I6 264 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 ZNF114Q8NC26 417 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 DPF1Q92782 380 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 OR5B12Q96R08 314 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 NUDT15Q9NV35 164 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 FBXL7Q9UJT9 491 aa10.25□□□□□ -0.77
CKAP2-202ENST00000378034 PKD1L1Q8TDX9 2849 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 TRRAPQ9Y4A5 3859 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 WNK1Q9H4A3 2382 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 OR2J3O76001 311 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 H2AFB2P0C5Z0 115 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 CD33P20138 364 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 C15orf32Q32M92 178 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 OR1P1Q8NH06 330 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 ENKURQ8TC29 256 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 RANGRFQ9HD47 186 aaPredicted RBP10.24□□□□□ -0.77
CKAP2-202ENST00000378034 ENY2Q9NPA8 101 aa10.24□□□□□ -0.77
CKAP2-202ENST00000378034 LINC01619G3V211 115 aa10.23□□□□□ -0.77
CKAP2-202ENST00000378034 DUSP18Q8NEJ0 188 aa10.23□□□□□ -0.77
CKAP2-202ENST00000378034 CXorf58Q96LI9 332 aa10.23□□□□□ -0.77
CKAP2-202ENST00000378034 TRAV6A0A075B6T7 132 aa10.23□□□□□ -0.77
CKAP2-202ENST00000378034 A0A1B0GVG6 124 aa10.23□□□□□ -0.77
CKAP2-202ENST00000378034 DCTN2Q13561 401 aaKnown RBP10.23□□□□□ -0.77
CKAP2-202ENST00000378034 EXOSC2Q13868 293 aaKnown RBP10.23□□□□□ -0.77
CKAP2-202ENST00000378034 C19orf35Q6ZS72 473 aa10.23□□□□□ -0.77
CKAP2-202ENST00000378034 MITD1Q8WV92 249 aa10.23□□□□□ -0.77
CKAP2-202ENST00000378034 RCC1LQ96I51 464 aaKnown RBP10.23□□□□□ -0.77
CKAP2-202ENST00000378034 DUX3Q96PT4 197 aa10.23□□□□□ -0.77
CKAP2-202ENST00000378034 PEF1Q9UBV8 284 aaKnown RBP10.23□□□□□ -0.77
CKAP2-202ENST00000378034 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.22□□□□□ -0.77
CKAP2-202ENST00000378034 NDUFB8O95169 186 aa10.22□□□□□ -0.77
CKAP2-202ENST00000378034 SNCAP37840 140 aa10.22□□□□□ -0.77
CKAP2-202ENST00000378034 HOXA1P49639 335 aaPredicted RBP10.22□□□□□ -0.77
CKAP2-202ENST00000378034 SUB1P53999 127 aaKnown RBP eCLIP10.22□□□□□ -0.77
CKAP2-202ENST00000378034 SLC25A24Q6NUK1 477 aa10.22□□□□□ -0.77
CKAP2-202ENST00000378034 VN1R17PQ8TDU5 208 aa10.22□□□□□ -0.77
CKAP2-202ENST00000378034 EEF1AKMT3Q96AZ1 226 aa10.22□□□□□ -0.77
CKAP2-202ENST00000378034 MCRIP2Q9BUT9 160 aaKnown RBP10.22□□□□□ -0.77
CKAP2-202ENST00000378034 IGHV4OR15-8A0A075B7B6 117 aa10.21□□□□□ -0.77
CKAP2-202ENST00000378034 A0A087WW49 117 aa10.21□□□□□ -0.77
CKAP2-202ENST00000378034 TRBV7-1A0A0A6YYK4 115 aa10.21□□□□□ -0.77
CKAP2-202ENST00000378034 ZP3P21754 424 aa10.21□□□□□ -0.77
CKAP2-202ENST00000378034 DEFA5Q01523 94 aa10.21□□□□□ -0.77
CKAP2-202ENST00000378034 OR1S1Q8NH92 325 aa10.21□□□□□ -0.77
CKAP2-202ENST00000378034 HSPB7Q9UBY9 170 aa10.21□□□□□ -0.77
CKAP2-202ENST00000378034 DMRT1Q9Y5R6 373 aa10.21□□□□□ -0.77
CKAP2-202ENST00000378034 FAM90A26D6RGX4 464 aa10.21□□□□□ -0.78
CKAP2-202ENST00000378034 PITX3O75364 302 aa10.21□□□□□ -0.78
CKAP2-202ENST00000378034 IFNA21P01568 189 aa10.21□□□□□ -0.78
CKAP2-202ENST00000378034 HOXB5P09067 269 aa10.21□□□□□ -0.78
CKAP2-202ENST00000378034 SPINK9Q5DT21 86 aa10.21□□□□□ -0.78
CKAP2-202ENST00000378034 GGNBP1Q5YKI7 109 aa10.21□□□□□ -0.78
CKAP2-202ENST00000378034 NRARPQ7Z6K4 114 aa10.21□□□□□ -0.78
CKAP2-202ENST00000378034 ZNF431Q8TF32 576 aaPredicted RBP10.21□□□□□ -0.78
CKAP2-202ENST00000378034 ATP6V0BQ99437 205 aa10.21□□□□□ -0.78
CKAP2-202ENST00000378034 GPR61Q9BZJ8 451 aa10.21□□□□□ -0.78
CKAP2-202ENST00000378034 ANKRD34BA5PLL1 514 aa10.2□□□□□ -0.78
CKAP2-202ENST00000378034 CEBPZOSA8MTT3 80 aa10.2□□□□□ -0.78
CKAP2-202ENST00000378034 IL5P05113 134 aa10.2□□□□□ -0.78
CKAP2-202ENST00000378034 MFAP2P55001 183 aa10.2□□□□□ -0.78
CKAP2-202ENST00000378034 TNFRSF9Q07011 255 aa10.2□□□□□ -0.78
CKAP2-202ENST00000378034 PLET1Q6UQ28 207 aa10.2□□□□□ -0.78
CKAP2-202ENST00000378034 HIPK2Q9H2X6 1198 aa10.2□□□□□ -0.78
CKAP2-202ENST00000378034 PALMDQ9NP74 551 aa10.2□□□□□ -0.78
CKAP2-202ENST00000378034 MGAM2Q2M2H8 2515 aa10.2□□□□□ -0.78
CKAP2-202ENST00000378034 CORTO00230 105 aa10.19□□□□□ -0.78
CKAP2-202ENST00000378034 HTR2BP41595 481 aa10.19□□□□□ -0.78
CKAP2-202ENST00000378034 BSXQ3C1V8 233 aa10.19□□□□□ -0.78
CKAP2-202ENST00000378034 PVRIGQ6DKI7 326 aa10.19□□□□□ -0.78
CKAP2-202ENST00000378034 OR52B4Q8NGK2 314 aa10.19□□□□□ -0.78
CKAP2-202ENST00000378034 HEYLQ9NQ87 328 aaPredicted RBP10.19□□□□□ -0.78
CKAP2-202ENST00000378034 PRAF2O60831 178 aa10.19□□□□□ -0.78
CKAP2-202ENST00000378034 MED6O75586 246 aa10.19□□□□□ -0.78
CKAP2-202ENST00000378034 HOXD3P31249 432 aaPredicted RBP10.19□□□□□ -0.78
CKAP2-202ENST00000378034 NOXA1Q86UR1 476 aa10.19□□□□□ -0.78
CKAP2-202ENST00000378034 ZNF502Q8TBZ5 544 aa10.19□□□□□ -0.78
CKAP2-202ENST00000378034 MFSD2BA6NFX1 497 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms