RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 ATP5G3P48201 142 aa15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 RNASE6Q93091 150 aaKnown RBP15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 Q9H3A6 140 aa15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 ANKRD31Q8N7Z5 1873 aa15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 COLCA1Q6ZS62 124 aa15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 SAA1P0DJI8 122 aaPredicted RBP15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 CIARTQ8N365 385 aaPredicted RBP15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 PLPPR1Q8TBJ4 325 aa15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 VWCEQ96DN2 955 aa15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 TOMM7Q9P0U1 55 aa15.95■□□□□ 0.14
TBC1D4-201ENST00000377625 NBR2O15453 112 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 LHX2P50458 406 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 LINC00114Q6XXX2 140 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 H3BRM9 83 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 LTBRP36941 435 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 MRPL16Q9NX20 251 aaKnown RBP15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 PRB3Q04118 309 aaPredicted RBP15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 ZNF646O15015 1829 aaPredicted RBP15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 ATAD5Q96QE3 1844 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 SAA2-SAA4A0A096LPE2 208 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 MPTX1A8MV57 137 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 SAA2P0DJI9 122 aaPredicted RBP15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 PAX1P15863 534 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 FER1L6-AS1Q8NA97 138 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 IMMP2LQ96T52 175 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 FOXC2Q99958 501 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 COL11A2P13942 1736 aaPredicted RBP15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 A0A1B0GTI1 187 aa15.94■□□□□ 0.14
TBC1D4-201ENST00000377625 HOXA5P20719 270 aa15.93■□□□□ 0.14
TBC1D4-201ENST00000377625 EFNB1P98172 346 aa15.93■□□□□ 0.14
TBC1D4-201ENST00000377625 AICDAQ9GZX7 198 aa15.93■□□□□ 0.14
TBC1D4-201ENST00000377625 FAM209BQ5JX69 171 aa15.93■□□□□ 0.14
TBC1D4-201ENST00000377625 FAM71F2Q6NXP2 309 aa15.93■□□□□ 0.14
TBC1D4-201ENST00000377625 TTC9CQ8N5M4 171 aa15.93■□□□□ 0.14
TBC1D4-201ENST00000377625 NPFFR1Q9GZQ6 430 aa15.93■□□□□ 0.14
TBC1D4-201ENST00000377625 C1QTNF9BB2RNN3 333 aa15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 FAM131CQ96AQ9 280 aa15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 WBP1Q96G27 269 aa15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 STRCP1A6NGW2 1772 aa15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 CASP8AP2Q9UKL3 1982 aa15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 COL5A3P25940 1745 aaPredicted RBP15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 SRP19P09132 144 aaKnown RBP15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 JKAMPQ9P055 326 aa15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 SOX21Q9Y651 276 aaPredicted RBP15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 TSPAN13O95857 204 aa15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 TMEM105Q8N8V8 129 aa15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 TBL2Q9Y4P3 447 aaKnown RBP15.92■□□□□ 0.14
TBC1D4-201ENST00000377625 UPK2O00526 184 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 SPTBP11277 2137 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 VDAC2P45880 294 aaPredicted RBP15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 Q6AWC8 147 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 A0A1B0GW15 77 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 SDHCQ99643 169 aaPredicted RBP15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 MYOD1P15172 320 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 ZNF525Q8N782 197 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 TRBV6-7A0A0A0MS04 114 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 DMRT1Q9Y5R6 373 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 TDGF1P13385 188 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 SAMD13Q5VXD3 122 aa15.91■□□□□ 0.14
TBC1D4-201ENST00000377625 SNRNP200O75643 2136 aaKnown RBP15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 TCF23Q7RTU1 214 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 SNAI2O43623 268 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 YPEL1O60688 119 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 CTAG1AP78358 180 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 NEUROG1Q92886 237 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 YPEL2Q96QA6 119 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 IGFBP3P17936 291 aaPredicted RBP15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 IGLV3-12A0A075B6K2 115 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 CFAP161Q6P656 301 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 ORMDL3Q8N138 153 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 TMEM133Q9H2Q1 129 aa15.9■□□□□ 0.14
TBC1D4-201ENST00000377625 TMEM144Q7Z5S9 345 aa15.89■□□□□ 0.14
TBC1D4-201ENST00000377625 GLMPQ8WWB7 406 aa15.89■□□□□ 0.14
TBC1D4-201ENST00000377625 OTORQ9NRC9 128 aa15.89■□□□□ 0.14
TBC1D4-201ENST00000377625 COL11A1P12107 1806 aaPredicted RBP15.89■□□□□ 0.13
TBC1D4-201ENST00000377625 STHQ8IWL8 128 aa15.89■□□□□ 0.13
TBC1D4-201ENST00000377625 C14orf144Q96I85 54 aa15.89■□□□□ 0.13
TBC1D4-201ENST00000377625 PRSS22Q9GZN4 317 aa15.89■□□□□ 0.13
TBC1D4-201ENST00000377625 PEF1Q9UBV8 284 aaKnown RBP15.89■□□□□ 0.13
TBC1D4-201ENST00000377625 CD24P25063 80 aa15.89■□□□□ 0.13
TBC1D4-201ENST00000377625 CNTFRP26992 372 aa15.89■□□□□ 0.13
TBC1D4-201ENST00000377625 LDLRAD2Q5SZI1 272 aa15.89■□□□□ 0.13
TBC1D4-201ENST00000377625 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 LDLRAD4O15165 306 aa15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 ZCCHC24Q8N2G6 241 aaKnown RBP15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 NUDT11Q96G61 164 aa15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 IZUMO1RA6ND01 250 aa15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 CD7P09564 240 aa15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 LOC102723996A0A087X1L8 192 aa15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 TMEM167AQ8TBQ9 72 aa15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 MDC1Q14676 2089 aaKnown RBP15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 RGPD3A6NKT7 1758 aaPredicted RBP15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 NDUFA3O95167 84 aa15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 THBDP07204 575 aa15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 MORN2Q502X0 79 aa15.88■□□□□ 0.13
TBC1D4-201ENST00000377625 TMEM50AO95807 157 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 OR10J3Q5JRS4 329 aa15.87■□□□□ 0.13
TBC1D4-201ENST00000377625 LEMD1Q68G75 181 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms