RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 ELOVL5Q9NYP7 299 aa13.27□□□□□ -0.28
TRIM27-202ENST00000377199 LHFPL4Q7Z7J7 247 aa13.27□□□□□ -0.29
TRIM27-202ENST00000377199 ZNF664Q8N3J9 261 aa13.27□□□□□ -0.29
TRIM27-202ENST00000377199 RBMXL3Q8N7X1 1067 aaKnown RBP13.27□□□□□ -0.29
TRIM27-202ENST00000377199 TMEM18Q96B42 140 aa13.27□□□□□ -0.29
TRIM27-202ENST00000377199 SLC25A10Q9UBX3 287 aaPredicted RBP13.27□□□□□ -0.29
TRIM27-202ENST00000377199 DSCAML1Q8TD84 2053 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 CCKARP32238 428 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 TMPRSS3P57727 454 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 USF2Q15853 346 aaPredicted RBP13.26□□□□□ -0.29
TRIM27-202ENST00000377199 OR2T6Q8NHC8 308 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 TEX50A0A1B0GTY4 177 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 A8MXE2 369 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 ZNF788Q6ZQV5 615 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 LINC00469Q8N7U9 141 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 FAM169BQ8N8A8 192 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 A0A1B0GV90 55 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 E7EUB6 86 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 ZNF439Q8NDP4 499 aa13.26□□□□□ -0.29
TRIM27-202ENST00000377199 RNASE7Q9H1E1 156 aaKnown RBP13.26□□□□□ -0.29
TRIM27-202ENST00000377199 RPUSD1Q9UJJ7 312 aaKnown RBP13.26□□□□□ -0.29
TRIM27-202ENST00000377199 TANC2Q9HCD6 1990 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 IGHV3-72A0A0B4J1Y9 119 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 TRAV5A0A0B4J249 113 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 REG1AP05451 166 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 MGST1P10620 155 aaKnown RBP13.25□□□□□ -0.29
TRIM27-202ENST00000377199 IER3P46695 156 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 PQLC2Q6ZP29 291 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 UHRF2Q96PU4 802 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 COMMD5Q9GZQ3 224 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 PRNDQ9UKY0 176 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 UPK2O00526 184 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 CEACAM4O75871 244 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 MT-CO2P00403 227 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 RPL15P61313 204 aaKnown RBP13.25□□□□□ -0.29
TRIM27-202ENST00000377199 SUMO1P63165 101 aaKnown RBP13.25□□□□□ -0.29
TRIM27-202ENST00000377199 Q6ZS92 163 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 RAB9BQ9NP90 201 aa13.25□□□□□ -0.29
TRIM27-202ENST00000377199 ZZEF1O43149 2961 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 SVEP1Q4LDE5 3571 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 hADV38S2A0JD32 116 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 PLAUP00749 431 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 LINC00869P0C866 280 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 RPL29P47914 159 aaKnown RBP13.24□□□□□ -0.29
TRIM27-202ENST00000377199 LCN2P80188 198 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 CENPWQ5EE01 88 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 TMEM144Q7Z5S9 345 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 TYMSP04818 313 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 GATA4P43694 442 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 SSBP2P81877 361 aaPredicted RBP13.24□□□□□ -0.29
TRIM27-202ENST00000377199 PRCDQ00LT1 54 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 BSPH1Q075Z2 132 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 MORN5Q5VZ52 161 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 TMEM108Q6UXF1 575 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 SLC25A48Q6ZT89 311 aaKnown RBP13.24□□□□□ -0.29
TRIM27-202ENST00000377199 OR8I2Q8N0Y5 310 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 OR10X1Q8NGY0 326 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 SERTAD4Q9NUC0 356 aa13.24□□□□□ -0.29
TRIM27-202ENST00000377199 GATCO43716 136 aaKnown RBP13.23□□□□□ -0.29
TRIM27-202ENST00000377199 GNG4P50150 75 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 RAB4BP61018 213 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 PRR20EP86478 221 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 PRR20CP86479 221 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 PRR20DP86480 221 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 PRR20BP86481 221 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 PRR20AP86496 221 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 FAM222BQ8WU58 562 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 ADTRPQ96IZ2 230 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 SAP30LQ9HAJ7 183 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 HELTA6NFD8 242 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 LYPD2Q6UXB3 125 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 NEUROG1Q92886 237 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 EAF1Q96JC9 268 aaPredicted RBP13.23□□□□□ -0.29
TRIM27-202ENST00000377199 SFXN3Q9BWM7 321 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 TLN1Q9Y490 2541 aaKnown RBP13.23□□□□□ -0.29
TRIM27-202ENST00000377199 MUC6Q6W4X9 2439 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 A0A0G2JNJ9 132 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 NKX6-3A6NJ46 265 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 FCN1O00602 326 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 KIAA1644Q3SXP7 199 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 GBGT1Q8N5D6 347 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.23□□□□□ -0.29
TRIM27-202ENST00000377199 OR5R1Q8NH85 324 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 LINC00479Q96M42 142 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 Q9UFV3 132 aa13.23□□□□□ -0.29
TRIM27-202ENST00000377199 IGHV3-21A0A0B4J1V1 117 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 DPRXA6NFQ7 191 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 ENSAO43768 121 aaKnown RBP13.22□□□□□ -0.29
TRIM27-202ENST00000377199 CA1P00915 261 aaPredicted RBP13.22□□□□□ -0.29
TRIM27-202ENST00000377199 CD99P14209 185 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 FOXL1Q12952 345 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 KRTCAP3Q53RY4 240 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 OR1L6Q8NGR2 347 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 SLC45A2Q9UMX9 530 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 ABCA4P78363 2273 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 ZNF318Q5VUA4 2279 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 ZNF705FA8MVS1 300 aaPredicted RBP13.22□□□□□ -0.29
TRIM27-202ENST00000377199 F2Z2F3 143 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 APOA2P02652 100 aa13.22□□□□□ -0.29
TRIM27-202ENST00000377199 ZNF705DP0CH99 300 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms