RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PKIAP61925 76 aa11.38□□□□□ -0.59
C9orf47-203ENST00000375851 RSPO3Q9BXY4 272 aaPredicted RBP11.38□□□□□ -0.59
C9orf47-203ENST00000375851 UPK2O00526 184 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 OTX1P32242 354 aaPredicted RBP11.37□□□□□ -0.59
C9orf47-203ENST00000375851 GPX4P36969 197 aaPredicted RBP11.37□□□□□ -0.59
C9orf47-203ENST00000375851 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
C9orf47-203ENST00000375851 ICAM4Q14773 271 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 GTF2H5Q6ZYL4 71 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 DUTP33316 252 aaKnown RBP11.37□□□□□ -0.59
C9orf47-203ENST00000375851 TEX29Q8N6K0 151 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 CDC42EP3Q9UKI2 254 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 RBFOX2O43251 390 aaKnown RBP eCLIP11.37□□□□□ -0.59
C9orf47-203ENST00000375851 PSPNO60542 156 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 GCGP01275 180 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 CD55P08174 381 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 RELQ04864 619 aaPredicted RBP11.37□□□□□ -0.59
C9orf47-203ENST00000375851 LRTM2Q8N967 370 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 FOXA2Q9Y261 457 aaPredicted RBP11.37□□□□□ -0.59
C9orf47-203ENST00000375851 SELLP14151 372 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 SRIP30626 198 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 HERVK_113P61574 105 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 SUPT4H1P63272 117 aaKnown RBP11.37□□□□□ -0.59
C9orf47-203ENST00000375851 TMEM144Q7Z5S9 345 aa11.37□□□□□ -0.59
C9orf47-203ENST00000375851 SMUG1Q53HV7 270 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 FAM168AQ92567 244 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 TMEM133Q9H2Q1 129 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 C21orf62Q9NYP8 219 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 FBXL7Q9UJT9 491 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 TRGV3P03979 118 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 TMEM42Q69YG0 159 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 ZNF841Q6ZN19 808 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 RNASEH2CQ8TDP1 164 aaKnown RBP11.36□□□□□ -0.59
C9orf47-203ENST00000375851 FANCMQ8IYD8 2048 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 IGHV3-49A0A0A0MS15 119 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 IFITM10A6NMD0 228 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 CD99P14209 185 aa11.36□□□□□ -0.59
C9orf47-203ENST00000375851 IGHV3-23P01764 117 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 ATP5G3P48201 142 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 CX3CL1P78423 397 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 LY6DQ14210 128 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 RNFT1Q5M7Z0 435 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 ATRAIDQ6UW56 229 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 NEU1Q99519 415 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 LRRK1Q38SD2 2015 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 C15orf61A6NNL5 157 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 NAPSAO96009 420 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 AMY1AP04745 511 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 ANOS1P23352 680 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 OR4D5Q8NGN0 318 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 CBLN4Q9NTU7 201 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 DOCK10Q96BY6 2186 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 RPS20P60866 119 aaKnown RBP11.35□□□□□ -0.59
C9orf47-203ENST00000375851 CLDND2Q8NHS1 167 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 SLC25A15Q9Y619 301 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 MUC6Q6W4X9 2439 aa11.35□□□□□ -0.59
C9orf47-203ENST00000375851 MBNL2Q5VZF2 373 aaKnown RBP11.34□□□□□ -0.59
C9orf47-203ENST00000375851 MIR17HGQ75NE6 70 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 OR52E5Q8NH55 327 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 GRIFINA4D1Z8 144 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 LEPROTL1O95214 131 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 CDX1P47902 265 aaPredicted RBP11.34□□□□□ -0.59
C9orf47-203ENST00000375851 CENPVQ7Z7K6 275 aaPredicted RBP11.34□□□□□ -0.59
C9orf47-203ENST00000375851 ARPC1AQ92747 370 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 VOPP1Q96AW1 172 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 WNT10AQ9GZT5 417 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 C7orf69Q9H7B7 122 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 PHLDA3Q9Y5J5 127 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 ANAPC1Q9H1A4 1944 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 SCO2A0A1W2PP80 73 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 LILRA1O75019 489 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 BTF3P20290 206 aaKnown RBP11.34□□□□□ -0.59
C9orf47-203ENST00000375851 CBLN1P23435 193 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 SRSF7Q16629 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
C9orf47-203ENST00000375851 TBR1Q16650 682 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 IGHV3OR16-8A0A075B7F1 116 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 DLX6P56179 175 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 QRFPP83859 136 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 C2orf83Q53S99 150 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 SAPCD1Q5SSQ6 148 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 PPP1R27Q86WC6 154 aa11.34□□□□□ -0.59
C9orf47-203ENST00000375851 SNCGO76070 127 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 GPX1P07203 203 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 DDB2Q92466 427 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 RPUSD1Q9UJJ7 312 aaKnown RBP11.33□□□□□ -0.6
C9orf47-203ENST00000375851 FOXI3A8MTJ6 420 aaPredicted RBP11.33□□□□□ -0.6
C9orf47-203ENST00000375851 SIAH2O43255 324 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 CD24P25063 80 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 GPR183P32249 361 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 SRSF9Q13242 221 aaKnown RBP eCLIP11.33□□□□□ -0.6
C9orf47-203ENST00000375851 SLC17A3O00476 420 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 ZNF207O43670 478 aaKnown RBP11.33□□□□□ -0.6
C9orf47-203ENST00000375851 OR9G9P0C7N8 305 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 RPL13AP40429 203 aaKnown RBP11.33□□□□□ -0.6
C9orf47-203ENST00000375851 CBY3A6NI87 242 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 HAX1O00165 279 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 NBR2O15453 112 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 FOXL2NBQ6ZUU3 175 aa11.33□□□□□ -0.6
C9orf47-203ENST00000375851 ZFP30Q9Y2G7 519 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms