RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 RAB14P61106 215 aa12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 GNB1P62873 340 aa12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 ARSJQ5FYB0 599 aaPredicted RBP12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 PVRIGQ6DKI7 326 aa12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 C19orf35Q6ZS72 473 aa12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 Q8N9W7 124 aa12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 RNF141Q8WVD5 230 aa12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 SRSF12Q8WXF0 261 aaKnown RBP12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 P2RX4Q99571 388 aa12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 RSG1Q9BU20 258 aa12.47□□□□□ -0.41
NIPAL3-204ENST00000374399 FSHBP01225 129 aa12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 IFNA5P01569 189 aa12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 REG1AP05451 166 aa12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 FAM106CPP0CH98 169 aa12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 OR13C7P0DN81 318 aa12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 BRS3P32247 399 aa12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 MFAP2P55001 183 aa12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 EIF5AL1Q6IS14 154 aaKnown RBP12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 TAF15Q92804 592 aaKnown RBP eCLIP12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 UQCC1Q9NVA1 299 aa12.46□□□□□ -0.41
NIPAL3-204ENST00000374399 IFNA4P05014 189 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 APELAP0DMC3 54 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 FHITP49789 147 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 ATP5IP56385 69 aaPredicted RBP12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 RAB11AP62491 216 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 DLK1P80370 383 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 ERHP84090 104 aaKnown RBP12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 NDPQ00604 133 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 PLGLAQ15195 96 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 MLANAQ16655 118 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 CENPVQ7Z7K6 275 aaPredicted RBP12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 OR2G3Q8NGZ4 309 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 FOXC2Q99958 501 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 GGACTQ9BVM4 153 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 KIAA1456Q9P272 454 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 DMRT1Q9Y5R6 373 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 FLNAP21333 2647 aaKnown RBP12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 MXRA5Q9NR99 2828 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 TEX46H3BTG2 121 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 TREML4Q6UXN2 200 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 TMEM182Q6ZP80 229 aaPredicted RBP12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 ZNF114Q8NC26 417 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 GNPNAT1Q96EK6 184 aaPredicted RBP12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 WDR83OSQ9Y284 106 aa12.45□□□□□ -0.42
NIPAL3-204ENST00000374399 NCBP2LA6PVI3 153 aaKnown RBP12.44□□□□□ -0.42
NIPAL3-204ENST00000374399 ACTL6BO94805 426 aa12.44□□□□□ -0.42
NIPAL3-204ENST00000374399 SCAF4O95104 1147 aaKnown RBP12.44□□□□□ -0.42
NIPAL3-204ENST00000374399 CX3CL1P78423 397 aa12.44□□□□□ -0.42
NIPAL3-204ENST00000374399 MED9Q9NWA0 146 aa12.44□□□□□ -0.42
NIPAL3-204ENST00000374399 LSM4Q9Y4Z0 139 aaKnown RBP12.44□□□□□ -0.42
NIPAL3-204ENST00000374399 ANK3Q12955 4377 aaKnown RBP12.44□□□□□ -0.42
NIPAL3-204ENST00000374399 ZNF705EA8MWA4 302 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 EGR2P11161 476 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 SNCAP37840 140 aa12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 FXYD3Q14802 87 aa12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 ASPHD1Q5U4P2 390 aa12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 ZNF562Q6V9R5 426 aa12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 BCL6BQ8N143 479 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 LRRC20Q8TCA0 184 aa12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 SCGB1C1Q8TD33 95 aa12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 SSMEM1Q8WWF3 244 aa12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 SAT2Q96F10 170 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 PSMG3Q9BT73 122 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 FNDC4Q9H6D8 234 aaPredicted RBP12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 FBXO7Q9Y3I1 522 aa12.43□□□□□ -0.42
NIPAL3-204ENST00000374399 IGHV7-81A0A0B4J1V7 117 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 AMY1AP04745 511 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 FGF7P21781 194 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 PXDC1Q5TGL8 231 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 SLC25A24Q6NUK1 477 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 SSX3Q99909 188 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 HSPB9Q9BQS6 159 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 FAM103A1Q9BTL3 118 aaKnown RBP12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 NPCDR1Q9BY65 106 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 VSIRQ9H7M9 311 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 HLA-DRB1P01911 266 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 CD69Q07108 199 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 CYB5R2Q6BCY4 276 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 BTNL8Q6UX41 500 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 COMMD7Q86VX2 200 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 TMEM219Q86XT9 240 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 LYPD6BQ8NI32 183 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 RBM14Q96PK6 669 aaKnown RBP12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 MGST2Q99735 147 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 SRSF8Q9BRL6 282 aaKnown RBP12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 TIMM9Q9Y5J7 89 aa12.42□□□□□ -0.42
NIPAL3-204ENST00000374399 IGKV1OR2-108A0A075B7D4 117 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 MFSD2BA6NFX1 497 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 FNDC10F2Z333 226 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 CNIH1O95406 144 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 KRTAP1-1Q07627 177 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 GAMTQ14353 236 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 ACSM6Q6P461 480 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 Q6ZRG5 221 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 C5orf56Q8N8D9 126 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 PARP11Q9NR21 331 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 C1RLQ9NZP8 487 aa12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 MRPL36Q9P0J6 103 aaKnown RBP12.41□□□□□ -0.42
NIPAL3-204ENST00000374399 FBP1P09467 338 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms