RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 TMEM250H0YL14 139 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 DVL1O14640 695 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 KBTBD11O94819 623 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 IGKV1D-33P01593 117 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 IGKV1-33P01594 117 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 CDC34P49427 236 aaPredicted RBP11.43□□□□□ -0.58
LDB3-204ENST00000372066 PSMB3P49720 205 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 TMEM177Q53S58 311 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 PDPNQ86YL7 162 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 LINC00518Q8N0U6 118 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 OR5AN1Q8NGI8 311 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 VSTM2AQ8TAG5 236 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 TNFRSF14Q92956 283 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 HIST1H2BAQ96A08 127 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 CTSZQ9UBR2 303 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 OR51B2Q9Y5P1 312 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 ABCA1O95477 2261 aa11.43□□□□□ -0.58
LDB3-204ENST00000372066 IGHV4-30-2A0A087WSY4 118 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 RRHO14718 337 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 IFNA4P05014 189 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 CCL3L1P16619 93 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 RAB13P51153 203 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 FGF8P55075 233 aaPredicted RBP11.42□□□□□ -0.58
LDB3-204ENST00000372066 DLX6P56179 175 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 RAB5BP61020 215 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 MEF2BQ02080 365 aaPredicted RBP11.42□□□□□ -0.58
LDB3-204ENST00000372066 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 TREML4Q6UXN2 200 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 Q8N7P7 452 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 OR9G1Q8NH87 305 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 TMEM158Q8WZ71 300 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 PLEKHA3Q9HB20 300 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 NPVFQ9HCQ7 196 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 STAB1Q9NY15 2570 aa11.42□□□□□ -0.58
LDB3-204ENST00000372066 A0A1W2PPH5 198 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 SMCO3A2RU48 225 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 INS-IGF2F8WCM5 200 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 J3QR06 171 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 FCN3O75636 299 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 RBP4P02753 201 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 CRYBA1P05813 215 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 RAB31Q13636 194 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 CLEC2AQ6UVW9 174 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 LYPD2Q6UXB3 125 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 MUC15Q8N387 334 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 OR10X1Q8NGY0 326 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 MALSU1Q96EH3 234 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 C20orf24Q9BUV8 137 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 CBLN4Q9NTU7 201 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 C1orf196B1AJZ1 125 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 H0YJW9 148 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 USF1P22415 310 aaPredicted RBP11.41□□□□□ -0.58
LDB3-204ENST00000372066 DSCR9P59020 149 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 OR4C13Q8NGP0 309 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 RAB24Q969Q5 203 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 HARBI1Q96MB7 349 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 GGTLC1Q9BX51 225 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 MRPL20Q9BYC9 149 aaKnown RBP11.41□□□□□ -0.58
LDB3-204ENST00000372066 BIN3Q9NQY0 253 aa11.41□□□□□ -0.58
LDB3-204ENST00000372066 OR2C1O95371 312 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 SAA1P0DJI8 122 aaPredicted RBP11.4□□□□□ -0.58
LDB3-204ENST00000372066 MC5RP33032 325 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 AKR1C3P42330 323 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 CEBPGP53567 150 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 C2orf83Q53S99 150 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 ABHD12Q8N2K0 398 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 OR1L8Q8NGR8 309 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 ST6GALNAC6Q969X2 333 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 FLYWCH2Q96CP2 140 aaKnown RBP11.4□□□□□ -0.58
LDB3-204ENST00000372066 NABP2Q9BQ15 211 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 TMEM242Q9NWH2 141 aa11.4□□□□□ -0.58
LDB3-204ENST00000372066 LSM4Q9Y4Z0 139 aaKnown RBP11.4□□□□□ -0.58
LDB3-204ENST00000372066 A0A1W2PN81 502 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 A0A1W2PPV4 95 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 IGHV1-8P0DP01 117 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 CHRNA7P36544 502 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 RPS16P62249 146 aaKnown RBP11.39□□□□□ -0.59
LDB3-204ENST00000372066 S100A12P80511 92 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 BSXQ3C1V8 233 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 C11orf71Q6IPW1 123 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 TEPPQ6URK8 271 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 TMEM167AQ8TBQ9 72 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 TMEM170AQ8WVE7 144 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 CDC42EP3Q9UKI2 254 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 WASHC3Q9Y3C0 194 aa11.39□□□□□ -0.59
LDB3-204ENST00000372066 A0A096LNT2 108 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 A0A1W2PPE2 198 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 CA2P00918 260 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 IGHV2-70P01814 119 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 FBP1P09467 338 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 RAB5AP20339 215 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 RPL29P47914 159 aaKnown RBP11.38□□□□□ -0.59
LDB3-204ENST00000372066 LOXL1Q08397 574 aaPredicted RBP11.38□□□□□ -0.59
LDB3-204ENST00000372066 CYP2G1PQ6ZSU1 146 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 FAM168AQ92567 244 aa11.38□□□□□ -0.59
LDB3-204ENST00000372066 YPEL4Q96NS1 127 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms