RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ANXA7P20073 488 aaKnown RBP11.48□□□□□ -0.57
COL9A1-204ENST00000370496 FHL3Q13643 280 aa11.48□□□□□ -0.57
COL9A1-204ENST00000370496 ANKRD55Q3KP44 614 aa11.48□□□□□ -0.57
COL9A1-204ENST00000370496 ENKURQ8TC29 256 aa11.48□□□□□ -0.57
COL9A1-204ENST00000370496 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
COL9A1-204ENST00000370496 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-204ENST00000370496 NUDT15Q9NV35 164 aa11.48□□□□□ -0.57
COL9A1-204ENST00000370496 FBXL7Q9UJT9 491 aa11.48□□□□□ -0.57
COL9A1-204ENST00000370496 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 TRAV6A0A075B6T7 132 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 IGHV4OR15-8A0A075B7B6 117 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 A0A087WW49 117 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 TCRBP04435 133 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 OR4E1P0C645 316 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 SULT1A3P0DMM9 295 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 SULT1A4P0DMN0 295 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 DHRS2Q13268 280 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 LYZL2Q7Z4W2 148 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 GPR146Q96CH1 333 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 THYN1Q9P016 225 aa11.47□□□□□ -0.57
COL9A1-204ENST00000370496 F11RQ9Y624 299 aaKnown RBP11.47□□□□□ -0.57
COL9A1-204ENST00000370496 C9orf170A2RU37 121 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 NXPH3O95157 252 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 HSPB1P04792 205 aaKnown RBP11.46□□□□□ -0.57
COL9A1-204ENST00000370496 DEFA1P59665 94 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 DEFA3P59666 94 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
COL9A1-204ENST00000370496 SMCO1Q147U7 214 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 NMSQ5H8A3 153 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 Q6ZRM9 215 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 LYG2Q86SG7 212 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 COQ8AQ8NI60 647 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 RCC1LQ96I51 464 aaKnown RBP11.46□□□□□ -0.57
COL9A1-204ENST00000370496 FANCD2OSQ96PS1 177 aa11.46□□□□□ -0.57
COL9A1-204ENST00000370496 SLURP1P55000 103 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 SPCS3P61009 180 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 FAM209BQ5JX69 171 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 ZNF343Q6P1L6 599 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 OR2C3Q8N628 320 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 LRTM2Q8N967 370 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 OR1L6Q8NGR2 347 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 OR1S1Q8NH92 325 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 EEF1AKMT3Q96AZ1 226 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 RANGRFQ9HD47 186 aaPredicted RBP11.45□□□□□ -0.58
COL9A1-204ENST00000370496 PEF1Q9UBV8 284 aaKnown RBP11.45□□□□□ -0.58
COL9A1-204ENST00000370496 CACFD1Q9UGQ2 172 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 S4R3C0 116 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 NBEAL1Q6ZS30 2694 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 CMYA5Q8N3K9 4069 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 FBN3Q75N90 2809 aa11.45□□□□□ -0.58
COL9A1-204ENST00000370496 CEBPZOSA8MTT3 80 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 NDUFB8O95169 186 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 IGHV3-23P01764 117 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 HOXB5P09067 269 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 IGLL1P15814 213 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 ZP3P21754 424 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 HOXD3P31249 432 aaPredicted RBP11.44□□□□□ -0.58
COL9A1-204ENST00000370496 SNCAP37840 140 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 IFITM3Q01628 133 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 AARDQ4LEZ3 155 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 ZNF114Q8NC26 417 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 WFDC9Q8NEX5 89 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 OR1P1Q8NH06 330 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 OR52E5Q8NH55 327 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 CXorf58Q96LI9 332 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 MCRIP2Q9BUT9 160 aaKnown RBP11.44□□□□□ -0.58
COL9A1-204ENST00000370496 TMED3Q9Y3Q3 217 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 DMRT1Q9Y5R6 373 aa11.44□□□□□ -0.58
COL9A1-204ENST00000370496 A0A1B0GU03 582 aa11.43□□□□□ -0.58
COL9A1-204ENST00000370496 MFSD2BA6NFX1 497 aa11.43□□□□□ -0.58
COL9A1-204ENST00000370496 G3V4G9 280 aa11.43□□□□□ -0.58
COL9A1-204ENST00000370496 DUS4LO95620 317 aaKnown RBP11.43□□□□□ -0.58
COL9A1-204ENST00000370496 TRBV12-3P01733 135 aa11.43□□□□□ -0.58
COL9A1-204ENST00000370496 H2AFB2P0C5Z0 115 aa11.43□□□□□ -0.58
COL9A1-204ENST00000370496 RPEL1Q2QD12 228 aa11.43□□□□□ -0.58
COL9A1-204ENST00000370496 C1QL4Q86Z23 238 aa11.43□□□□□ -0.58
COL9A1-204ENST00000370496 MISP3Q96FF7 219 aa11.43□□□□□ -0.58
COL9A1-204ENST00000370496 GPR61Q9BZJ8 451 aa11.43□□□□□ -0.58
COL9A1-204ENST00000370496 HEYLQ9NQ87 328 aaPredicted RBP11.43□□□□□ -0.58
COL9A1-204ENST00000370496 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.42□□□□□ -0.58
COL9A1-204ENST00000370496 OVOL1O14753 267 aa11.42□□□□□ -0.58
COL9A1-204ENST00000370496 MFAP2P55001 183 aa11.42□□□□□ -0.58
COL9A1-204ENST00000370496 KLK9Q2XQG4 91 aa11.42□□□□□ -0.58
COL9A1-204ENST00000370496 OXLD1Q5BKU9 147 aa11.42□□□□□ -0.58
COL9A1-204ENST00000370496 OR52B4Q8NGK2 314 aa11.42□□□□□ -0.58
COL9A1-204ENST00000370496 DCUN1D4Q92564 292 aa11.42□□□□□ -0.58
COL9A1-204ENST00000370496 CCDC140Q96MF4 163 aa11.42□□□□□ -0.58
COL9A1-204ENST00000370496 KLK9Q9UKQ9 250 aa11.42□□□□□ -0.58
COL9A1-204ENST00000370496 TRBV7-1A0A0A6YYK4 115 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 IGHV3-21A0A0B4J1V1 117 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 SEC14L6B5MCN3 397 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 PPP5D1E7EU14 171 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 INS-IGF2F8WCM5 200 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 IFNA21P01568 189 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 ARL3P36405 182 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 SUB1P53999 127 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL9A1-204ENST00000370496 TNFRSF9Q07011 255 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 PDLIM3Q53GG5 364 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-204ENST00000370496 SAMD5Q5TGI4 173 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms