RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 OR8B3Q8NGG8 313 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 DERL1Q9BUN8 251 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 LHFPL6Q9Y693 200 aa0.99□□□□□ -2.25
ECHDC1-201ENST00000368287 SETD5Q9C0A6 1442 aa0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 FABP5P3A8MUU1 101 aa0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 FAAHO00519 579 aa0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 NOS1APO75052 506 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 C1QAP02745 245 aa0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 RPS4Y1P22090 263 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 RPS20P60866 119 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 KCNJ8Q15842 424 aa0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 TMEM86AQ8N2M4 240 aa0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 OR8J2Q8NGG1 315 aa0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 MBD3L1Q8WWY6 194 aa0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 C11orf68Q9H3H3 251 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 PARVGQ9HBI0 331 aa0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 DIDO1Q9BTC0 2240 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-201ENST00000368287 MTUS2Q5JR59 1369 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 DLG5Q8TDM6 1919 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 TONSLQ96HA7 1378 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 ZNF106Q9H2Y7 1883 aaKnown RBP0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 FLG2Q5D862 2391 aaPredicted RBP0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 TRAPPC13A5PLN9 417 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 TMEM212A6NML5 194 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 CHP2O43745 196 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 IFNA16P05015 189 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 UBBP0CG47 229 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 HIST1H1TP22492 207 aaPredicted RBP0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 RPL5P46777 297 aaKnown RBP0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 UBE2IP63279 158 aaKnown RBP0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 ZNF345Q14585 488 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 HIST3H3Q16695 136 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 CCDC122Q5T0U0 273 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 DHFR2Q86XF0 187 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 Q8N2B8 174 aa0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 MRPL30Q8TCC3 161 aaKnown RBP0.97□□□□□ -2.25
ECHDC1-201ENST00000368287 TTC21AQ8NDW8 1320 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 PLXND1Q9Y4D7 1925 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 A0A1B0GV50 99 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 HLA-DRB1P01911 266 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 PMP2P02689 132 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 RPS17P08708 135 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 RPSAP08865 295 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 ZNF80P51504 273 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 SNRPD2P62316 118 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 HBA1P69905 142 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 RUNX1Q01196 453 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 CDK5R1Q15078 307 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 ELOBQ15370 118 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 ACOT6Q3I5F7 207 aaPredicted RBP0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 IBA57Q5T440 356 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 UNQ6190/PRO20217Q6UXQ8 127 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 BPIFA4PQ86YQ2 179 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 IMP4Q96G21 291 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 RETNLBQ9BQ08 111 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 ADAT1Q9BUB4 502 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 FBXL12Q9NXK8 326 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 MRPL27Q9P0M9 148 aaKnown RBP0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 ZFYVE9O95405 1425 aa0.96□□□□□ -2.26
ECHDC1-201ENST00000368287 POLEQ07864 2286 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 IGKV1D-42A0A075B6H8 117 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 MEIKINA0A087WXM9 373 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 FAM236DA0A1B0GTK5 79 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 IRGMA1A4Y4 181 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 CLDN24A6NM45 220 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 M0R036 132 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 FAM236CP0DP71 79 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 HIST1H2BOP23527 126 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 HIST1H2BBP33778 126 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 SULT1A1P50225 295 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 FXYD2P54710 66 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 HIST1H2BDP58876 126 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 HIST1H2BCP62807 126 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 SURF2Q15527 256 aaPredicted RBP0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 HIST2H2BEQ16778 126 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 LCN15Q6UWW0 184 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 ANKRD29Q8N6D5 301 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 CLDN22Q8N7P3 220 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 C10orf105Q8TEF2 133 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 HIST1H2BHQ93079 126 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 HIST1H2BNQ99877 126 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 HIST1H2BMQ99879 126 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 CYSTM1Q9H1C7 97 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 UBAP1Q9NZ09 502 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 ANAPC1Q9H1A4 1944 aa0.95□□□□□ -2.26
ECHDC1-201ENST00000368287 COL4A5P29400 1685 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 EXPH5Q8NEV8 1989 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 F8W036 122 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 PSMD12O00232 456 aaPredicted RBP0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 SDCBPO00560 298 aaPredicted RBP0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 CRYGAP11844 174 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 CD79AP11912 226 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 LSM6P62312 80 aaKnown RBP0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 ZNF846Q147U1 533 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 LPCAT3Q6P1A2 487 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 Q6ZQT0 140 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 CLVS1Q8IUQ0 354 aaPredicted RBP0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 C20orf196Q8IYI0 205 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 OR52R1Q8NGF1 315 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms