RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SGMS2Q8NHU3 365 aa9.66□□□□□ -0.86
SYNE1-204ENST00000367248 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 RBFOX2O43251 390 aaKnown RBP eCLIP9.65□□□□□ -0.86
SYNE1-204ENST00000367248 PEMTQ9UBM1 199 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 ISLRO14498 428 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 IER3P46695 156 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 PSG9Q00887 426 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 ZNF497Q6ZNH5 498 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 MRPL32Q9BYC8 188 aaKnown RBP9.65□□□□□ -0.86
SYNE1-204ENST00000367248 TIMM23O14925 209 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 NBR2O15453 112 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 Q6ZN92 141 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 ETV2O00321 342 aaPredicted RBP9.65□□□□□ -0.86
SYNE1-204ENST00000367248 IGFL3Q6UXB1 125 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 UBE2DNLQ8IWF7 75 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 LHFPL5Q8TAF8 219 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.86
SYNE1-204ENST00000367248 HEATR1Q9H583 2144 aaKnown RBP9.65□□□□□ -0.86
SYNE1-204ENST00000367248 FAM53AQ6NSI3 398 aaPredicted RBP9.65□□□□□ -0.87
SYNE1-204ENST00000367248 RPUSD1Q9UJJ7 312 aaKnown RBP9.65□□□□□ -0.87
SYNE1-204ENST00000367248 SNURFLB1AK76 121 aa9.65□□□□□ -0.87
SYNE1-204ENST00000367248 SAA1P0DJI8 122 aaPredicted RBP9.65□□□□□ -0.87
SYNE1-204ENST00000367248 COL8A2P25067 703 aa9.65□□□□□ -0.87
SYNE1-204ENST00000367248 MORN2Q502X0 79 aa9.65□□□□□ -0.87
SYNE1-204ENST00000367248 BTF3P20290 206 aaKnown RBP9.64□□□□□ -0.87
SYNE1-204ENST00000367248 FAM159AQ6UWV7 190 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 NOTCH3Q9UM47 2321 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 TSPOP30536 169 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 ZP1P60852 638 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 NHLRC3Q5JS37 347 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 LDLRAD2Q5SZI1 272 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 FAM110DQ8TAY7 271 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-204ENST00000367248 BEX4Q9NWD9 120 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-204ENST00000367248 TEX50A0A1B0GTY4 177 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 DLX6P56179 175 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 RIPPLY3P57055 190 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 GGACTQ9BVM4 153 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 WNT10AQ9GZT5 417 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 IL6RP08887 468 aaPredicted RBP9.64□□□□□ -0.87
SYNE1-204ENST00000367248 KLK15Q9H2R5 256 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 MUC21A0A0G2JKD1 596 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 MUC21A0A140T8X8 626 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 RRHO14718 337 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 WNT2P09544 360 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 MUC21Q5SSG8 566 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 PIP4P1Q86T03 277 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 OR8A1Q8NGG7 326 aa9.64□□□□□ -0.87
SYNE1-204ENST00000367248 M0QZK8 103 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 PACRGQ96M98 296 aaPredicted RBP9.63□□□□□ -0.87
SYNE1-204ENST00000367248 GFI1Q99684 422 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 UPK2O00526 184 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 SCGB1D4Q6XE38 83 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 C19orf35Q6ZS72 473 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 FOXL2NBQ6ZUU3 175 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 SRSF12Q8WXF0 261 aaKnown RBP9.63□□□□□ -0.87
SYNE1-204ENST00000367248 PNRC2Q9NPJ4 139 aaKnown RBP9.63□□□□□ -0.87
SYNE1-204ENST00000367248 DOCK10Q96BY6 2186 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 DPRXA6NFQ7 191 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 SIAH2O43255 324 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 IBA57Q5T440 356 aaKnown RBP9.63□□□□□ -0.87
SYNE1-204ENST00000367248 CYP2G1PQ6ZSU1 146 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 VAMP8Q9BV40 100 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 FUT9Q9Y231 359 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 CBY3A6NI87 242 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 CEACAM4O75871 244 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 C2orf68Q2NKX9 166 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 TNFRSF14Q92956 283 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 CACNA1AO00555 2505 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 ARL14EPLP0DKL9 152 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 ZNF585BQ52M93 769 aa9.63□□□□□ -0.87
SYNE1-204ENST00000367248 DANCRP0C864 163 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 WDR25Q64LD2 544 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-204ENST00000367248 IGKV1D-8A0A087WSZ0 117 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 C5orf63A6NC05 138 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 GOLT1AQ6ZVE7 132 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 SH3BGRL3Q9H299 93 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 ZNF324O75467 553 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-204ENST00000367248 CRYBB3P26998 211 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 OTX1P32242 354 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-204ENST00000367248 PMS2P11Q13670 270 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 IQCJQ1A5X6 159 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 CACNG8Q8WXS5 425 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 RPRMQ9NS64 109 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 RNASE1P07998 156 aaKnown RBP9.62□□□□□ -0.87
SYNE1-204ENST00000367248 RPL35AP18077 110 aaKnown RBP9.62□□□□□ -0.87
SYNE1-204ENST00000367248 ANOS1P23352 680 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
SYNE1-204ENST00000367248 TMEM42Q69YG0 159 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 NPCDR1Q9BY65 106 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 GCHFRP30047 84 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 RUSC1-AS1Q66K80 236 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 NEU1Q99519 415 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 TRAV34A0A0B4J273 112 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 M0R2Z0 102 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 NCMAPQ5T1S8 102 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 FAM169BQ8N8A8 192 aa9.62□□□□□ -0.87
SYNE1-204ENST00000367248 VOPP1Q96AW1 172 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms