RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 RP1P56715 2156 aa-0.04□□□□□ -2.42
RNU6-553P-201ENST00000364047 COL4A5P29400 1685 aa-0.04□□□□□ -2.42
RNU6-553P-201ENST00000364047 TRBV6-8A0A0A6YYG3 113 aa-0.04□□□□□ -2.42
RNU6-553P-201ENST00000364047 NDUFS6O75380 124 aaKnown RBP-0.04□□□□□ -2.42
RNU6-553P-201ENST00000364047 CAV1Q03135 178 aa-0.04□□□□□ -2.42
RNU6-553P-201ENST00000364047 DEFB128Q7Z7B8 93 aa-0.04□□□□□ -2.42
RNU6-553P-201ENST00000364047 NDEL1Q9GZM8 345 aa-0.04□□□□□ -2.42
RNU6-553P-201ENST00000364047 OR51I2Q9H344 312 aa-0.04□□□□□ -2.42
RNU6-553P-201ENST00000364047 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
RNU6-553P-201ENST00000364047 ADGRB2O60241 1585 aa-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 TRPC5OSA6NMA1 111 aa-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 CRYGAP11844 174 aa-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 ZNF25P17030 456 aaPredicted RBP-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 HADHBP55084 474 aaKnown RBP-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 BATFQ16520 125 aa-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 SPANXN5Q5MJ07 72 aa-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 SYCE1Q8N0S2 351 aa-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 GPR32P1Q8NGA4 272 aa-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 KCTD7Q96MP8 289 aa-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 NIT2Q9NQR4 276 aa-0.05□□□□□ -2.42
RNU6-553P-201ENST00000364047 KRTAP2-3P0C7H8 128 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 MAP2K4P45985 399 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 MAP3K7CLP57077 242 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 CCL20P78556 96 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 RSU1Q15404 277 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 CST9Q5W186 159 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 FUNDC1Q8IVP5 155 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 KRTAP2-4Q9BYR9 128 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 KRTAP2-1Q9BYU5 128 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 FAM96AQ9H5X1 160 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 C15orf41Q9Y2V0 281 aa-0.06□□□□□ -2.42
RNU6-553P-201ENST00000364047 CNTRLQ7Z7A1 2325 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 TRBV20OR9-2A0A075B6H5 130 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 TRAV1-1A0A0B4J248 108 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 F5H768 121 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 MIFP14174 115 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 SSR2P43308 183 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 EFNA4P52798 201 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 CIRBPQ14011 172 aaKnown RBP-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 AADACL3Q5VUY0 350 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 DPPA3Q6W0C5 159 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 COMMD7Q86VX2 200 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 OR4E2Q8NGC2 313 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 PFN4Q8NHR9 129 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 MCFD2Q8NI22 146 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 DNAJB3Q8WWF6 145 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 DIRAS2Q96HU8 199 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 SCGB3A1Q96QR1 104 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 TMEM147Q9BVK8 224 aa-0.07□□□□□ -2.42
RNU6-553P-201ENST00000364047 KMT2CQ8NEZ4 4911 aaKnown RBP-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 ZFC3H1O60293 1989 aaKnown RBP-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 ANAPC1Q9H1A4 1944 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 KCNK1O00180 336 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 UBL3O95164 117 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 RHOGP84095 191 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 BPIFA4PQ86YQ2 179 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 Q8N402 240 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 CNBD2Q96M20 576 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 GINS4Q9BRT9 223 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 DERL1Q9BUN8 251 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 ULBP3Q9BZM4 244 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 CDC42SE1Q9NRR8 79 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 TAS2R4Q9NYW5 299 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 MAST4O15021 2626 aa-0.08□□□□□ -2.42
RNU6-553P-201ENST00000364047 A0A0D9SG52 128 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 A0A0J9YY10 115 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 A0A1B0GX78 115 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 IQCF5A8MTL0 148 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 IFITM2Q01629 132 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 GUK1Q16774 197 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 MPV17LQ2QL34 196 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 SOSTDC1Q6X4U4 206 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 IQCF2Q8IXL9 164 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 SFT2D1Q8WV19 159 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 OPTNQ96CV9 577 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 MAP1LC3AQ9H492 121 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 RASL12Q9NYN1 266 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 PLAC8Q9NZF1 115 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 PCLOQ9Y6V0 5065 aa-0.09□□□□□ -2.42
RNU6-553P-201ENST00000364047 RAD50Q92878 1312 aa-0.1□□□□□ -2.42
RNU6-553P-201ENST00000364047 NAV2Q8IVL1 2488 aa-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 FABP12A6NFH5 140 aa-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 SSNA1O43805 119 aa-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 TYMSP04818 313 aa-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 BAALC-AS2P0C853 105 aa-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 GRK1Q15835 563 aa-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 RNASE10Q5GAN6 216 aaKnown RBP-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 SPANXN3Q5MJ09 141 aa-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 LCA10Q71F78 164 aa-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 GKN2Q86XP6 184 aa-0.1□□□□□ -2.43
RNU6-553P-201ENST00000364047 SYNE1Q8NF91 8797 aaKnown RBP-0.11□□□□□ -2.43
RNU6-553P-201ENST00000364047 NAV3Q8IVL0 2385 aa-0.11□□□□□ -2.43
RNU6-553P-201ENST00000364047 ACOX3O15254 700 aa-0.11□□□□□ -2.43
RNU6-553P-201ENST00000364047 CASQ1P31415 396 aa-0.11□□□□□ -2.43
RNU6-553P-201ENST00000364047 COQ5Q5HYK3 327 aa-0.11□□□□□ -2.43
RNU6-553P-201ENST00000364047 TEX261Q6UWH6 196 aa-0.11□□□□□ -2.43
RNU6-553P-201ENST00000364047 DEFB125Q8N687 156 aa-0.11□□□□□ -2.43
RNU6-553P-201ENST00000364047 OR5A1Q8NGJ0 315 aa-0.11□□□□□ -2.43
RNU6-553P-201ENST00000364047 CHMP4BQ9H444 224 aaKnown RBP-0.11□□□□□ -2.43
RNU6-553P-201ENST00000364047 U3KQ87 197 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms