RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 SDHCQ99643 169 aaPredicted RBP15.48■□□□□ 0.07
SHANK1-202ENST00000359082 IGLV3-21P80748 117 aaPredicted RBP15.48■□□□□ 0.07
SHANK1-202ENST00000359082 KBTBD11-OT1A0A1B0GTJ5 212 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 CDKN1AP38936 164 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 A0A1B0GUT8 65 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 TCF23Q7RTU1 214 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 STHQ8IWL8 128 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 LRTM2Q8N967 370 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 NEU4Q8WWR8 484 aaPredicted RBP15.47■□□□□ 0.07
SHANK1-202ENST00000359082 IGHV1-2P23083 117 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 VDAC2P45880 294 aaPredicted RBP15.47■□□□□ 0.07
SHANK1-202ENST00000359082 NPFFR1Q9GZQ6 430 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 PEMTQ9UBM1 199 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 GFI1BQ5VTD9 330 aa15.47■□□□□ 0.07
SHANK1-202ENST00000359082 TNS1Q9HBL0 1735 aaKnown RBP15.47■□□□□ 0.07
SHANK1-202ENST00000359082 NUP214P35658 2090 aaPredicted RBP15.46■□□□□ 0.07
SHANK1-202ENST00000359082 PAX1P15863 534 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.46■□□□□ 0.07
SHANK1-202ENST00000359082 GSN-AS1Q9NRJ2 163 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 RTBDNQ9BSG5 229 aaPredicted RBP15.46■□□□□ 0.07
SHANK1-202ENST00000359082 IFI6P09912 130 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 NEUROG1Q92886 237 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 FOXD3Q9UJU5 478 aaPredicted RBP15.46■□□□□ 0.07
SHANK1-202ENST00000359082 BRWD1Q9NSI6 2320 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 MSGN1A6NI15 193 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 CD8AP01732 235 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 STAG3L3P0CL85 134 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 ATP5IP56385 69 aaPredicted RBP15.46■□□□□ 0.07
SHANK1-202ENST00000359082 FAM181AQ8N9Y4 354 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 TM2D1Q9BX74 207 aa15.46■□□□□ 0.07
SHANK1-202ENST00000359082 TMEM42Q69YG0 159 aa15.46■□□□□ 0.06
SHANK1-202ENST00000359082 FAM169BQ8N8A8 192 aa15.46■□□□□ 0.06
SHANK1-202ENST00000359082 IZUMO1RA6ND01 250 aa15.45■□□□□ 0.06
SHANK1-202ENST00000359082 CD7P09564 240 aa15.45■□□□□ 0.06
SHANK1-202ENST00000359082 MYO7AQ13402 2215 aa15.45■□□□□ 0.06
SHANK1-202ENST00000359082 CA1P00915 261 aaPredicted RBP15.45■□□□□ 0.06
SHANK1-202ENST00000359082 COL4A5P29400 1685 aa15.45■□□□□ 0.06
SHANK1-202ENST00000359082 TFF1P04155 84 aa15.45■□□□□ 0.06
SHANK1-202ENST00000359082 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.44■□□□□ 0.06
SHANK1-202ENST00000359082 PRB4P10163 310 aaPredicted RBP15.44■□□□□ 0.06
SHANK1-202ENST00000359082 TMEM50AO95807 157 aa15.44■□□□□ 0.06
SHANK1-202ENST00000359082 WFDC12Q8WWY7 111 aa15.44■□□□□ 0.06
SHANK1-202ENST00000359082 TRIP12Q14669 1992 aaPredicted RBP15.44■□□□□ 0.06
SHANK1-202ENST00000359082 J3QW42 95 aa15.44■□□□□ 0.06
SHANK1-202ENST00000359082 LDLRAD2Q5SZI1 272 aa15.44■□□□□ 0.06
SHANK1-202ENST00000359082 FAM57AQ8TBR7 257 aa15.44■□□□□ 0.06
SHANK1-202ENST00000359082 GDF15Q99988 308 aa15.44■□□□□ 0.06
SHANK1-202ENST00000359082 DPH3P1Q9H4G8 78 aa15.43■□□□□ 0.06
SHANK1-202ENST00000359082 ABHD17AQ96GS6 310 aa15.43■□□□□ 0.06
SHANK1-202ENST00000359082 RNASE7Q9H1E1 156 aaKnown RBP15.43■□□□□ 0.06
SHANK1-202ENST00000359082 SPCS1Q9Y6A9 102 aa15.43■□□□□ 0.06
SHANK1-202ENST00000359082 A0A1W2PR77 199 aa15.43■□□□□ 0.06
SHANK1-202ENST00000359082 ZNF362Q5T0B9 420 aaPredicted RBP15.43■□□□□ 0.06
SHANK1-202ENST00000359082 SAA2-SAA4A0A096LPE2 208 aa15.43■□□□□ 0.06
SHANK1-202ENST00000359082 A0A0G2JK05 382 aa15.43■□□□□ 0.06
SHANK1-202ENST00000359082 SRP19P09132 144 aaKnown RBP15.43■□□□□ 0.06
SHANK1-202ENST00000359082 SAA2P0DJI9 122 aaPredicted RBP15.43■□□□□ 0.06
SHANK1-202ENST00000359082 SSBP4Q9BWG4 385 aaPredicted RBP15.43■□□□□ 0.06
SHANK1-202ENST00000359082 HIGD1CA8MV81 97 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 CD24P25063 80 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 SFTA2Q6UW10 78 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 NIT1Q86X76 327 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 ORMDL3Q8N138 153 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 ZIC4Q8N9L1 334 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 ST20Q9HBF5 79 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 SELENOKQ9Y6D0 94 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 SPAG17Q6Q759 2223 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 BRWD3Q6RI45 1802 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 CARHSP1Q9Y2V2 147 aaKnown RBP15.42■□□□□ 0.06
SHANK1-202ENST00000359082 LINC00614P0C842 121 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 CCL3L1P16619 93 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 ADMP35318 185 aa15.42■□□□□ 0.06
SHANK1-202ENST00000359082 C1QTNF5Q9BXJ0 243 aa15.41■□□□□ 0.06
SHANK1-202ENST00000359082 OTORQ9NRC9 128 aa15.41■□□□□ 0.06
SHANK1-202ENST00000359082 CIARTQ8N365 385 aaPredicted RBP15.41■□□□□ 0.06
SHANK1-202ENST00000359082 PSG7Q13046 419 aa15.41■□□□□ 0.06
SHANK1-202ENST00000359082 NSUN5P1Q3KNT7 163 aa15.41■□□□□ 0.06
SHANK1-202ENST00000359082 PLPPR1Q8TBJ4 325 aa15.41■□□□□ 0.06
SHANK1-202ENST00000359082 TMEM167AQ8TBQ9 72 aa15.41■□□□□ 0.06
SHANK1-202ENST00000359082 LOC105371267A0A1B0GV96 52 aa15.41■□□□□ 0.06
SHANK1-202ENST00000359082 TUBGCP6Q96RT7 1819 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 EVI2AP22794 236 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 FBLN7Q53RD9 439 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 ZNF837Q96EG3 531 aaPredicted RBP15.4■□□□□ 0.06
SHANK1-202ENST00000359082 SPAG8Q99932 426 aaPredicted RBP15.4■□□□□ 0.06
SHANK1-202ENST00000359082 LINC00312Q9Y6C7 94 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 C11orf68Q9H3H3 251 aaKnown RBP15.4■□□□□ 0.06
SHANK1-202ENST00000359082 LRRC37AA6NMS7 1700 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 NBR2O15453 112 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 SLC25A20O43772 301 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 SRD5A1P18405 259 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 PAX2Q02962 417 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 C9orf106Q8NAJ2 232 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 C19orf67A6NJJ6 358 aa15.4■□□□□ 0.06
SHANK1-202ENST00000359082 NPIPB13A6NJU9 1138 aa15.39■□□□□ 0.05
SHANK1-202ENST00000359082 IQCF6A8MYZ5 107 aa15.39■□□□□ 0.05
SHANK1-202ENST00000359082 VCX2Q9H322 139 aa15.39■□□□□ 0.05
SHANK1-202ENST00000359082 TAF1LQ8IZX4 1826 aa15.39■□□□□ 0.05
SHANK1-202ENST00000359082 PGPEP1LA6NFU8 196 aa15.39■□□□□ 0.05
SHANK1-202ENST00000359082 LHFPL4Q7Z7J7 247 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms