RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 SAMD5Q5TGI4 173 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 OTORQ9NRC9 128 aa3.47□□□□□ -1.85
SYNE2-204ENST00000358025 M0QZ24 198 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 LHX2P50458 406 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 CIRBPQ14011 172 aaKnown RBP3.46□□□□□ -1.85
SYNE2-204ENST00000358025 VGLL1Q99990 258 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 FOXQ1Q9C009 403 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 C9orf118A6NHY6 69 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 FCGR3BO75015 233 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 OR8B3Q8NGG8 313 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 RNF166Q96A37 237 aaPredicted RBP3.46□□□□□ -1.85
SYNE2-204ENST00000358025 SNRNP40Q96DI7 357 aaKnown RBP3.46□□□□□ -1.85
SYNE2-204ENST00000358025 FSCN3Q9NQT6 498 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 A0A0A6YYD4 124 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 IGHV3-64DA0A0J9YX35 117 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 HSPB6O14558 160 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 COX8AP10176 69 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 RBPJQ06330 500 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 C17orf82Q86X59 251 aaPredicted RBP3.46□□□□□ -1.85
SYNE2-204ENST00000358025 TEX29Q8N6K0 151 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 C18orf32Q8TCD1 76 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 HIGD1AQ9Y241 93 aa3.46□□□□□ -1.85
SYNE2-204ENST00000358025 A0A1W2PQF6 199 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 C8orf46Q8TAG6 207 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM186Q96B77 213 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 CACNG7P62955 275 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 TIMD4Q96H15 378 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF355PQ9NSJ1 428 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 NOTCH4Q99466 2003 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 H3BP45 60 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 METAP1P53582 386 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 C21orf62-AS1Q17RA5 79 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 C11orf1Q9H5F2 150 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 GOSR1O95249 250 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 CENPWQ5EE01 88 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 RIF1Q5UIP0 2472 aaKnown RBP3.46□□□□□ -1.86
SYNE2-204ENST00000358025 PSMB11A5LHX3 300 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 NXPH1P58417 271 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 DEFB103AP81534 67 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM240Q5SV17 173 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 TNRC6AQ8NDV7 1962 aaKnown RBP3.46□□□□□ -1.86
SYNE2-204ENST00000358025 A0A1W2PS18 150 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 ENSAO43768 121 aaKnown RBP3.46□□□□□ -1.86
SYNE2-204ENST00000358025 OTPQ5XKR4 325 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 SPCS1Q9Y6A9 102 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 COL4A4P53420 1690 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-204ENST00000358025 A0A0J9YW62 118 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 PLNP26678 52 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 C9orf172C9J069 976 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 CD300EQ496F6 205 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-204ENST00000358025 RAB1BQ9H0U4 201 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 HRKO00198 91 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 ATXN7O15265 892 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-204ENST00000358025 TRGV5A0A0B4J1U4 118 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 IL6RP08887 468 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-204ENST00000358025 SRSF2Q01130 221 aaKnown RBP3.46□□□□□ -1.86
SYNE2-204ENST00000358025 GFI1BQ5VTD9 330 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 RND1Q92730 232 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 SVIPQ8NHG7 77 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 HDHD3Q9BSH5 251 aaPredicted RBP3.46□□□□□ -1.86
SYNE2-204ENST00000358025 GHRHP01286 108 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 TPTE2P1Q5T6R2 138 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF818PQ6ZRF7 136 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 C2orf16Q68DN1 1984 aa3.46□□□□□ -1.86
SYNE2-204ENST00000358025 MS4A5Q9H3V2 200 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 KMT2EQ8IZD2 1858 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 TRAV17A0A0B4J275 112 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 RPEQ96AT9 228 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 TPPP3Q9BW30 176 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 GNB4Q9HAV0 340 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 SIGLEC8Q9NYZ4 499 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 CYSLTR1Q9Y271 337 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 MIC13Q5XKP0 118 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 IMMP1LQ96LU5 166 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF835Q9Y2P0 537 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 COL4A1P02462 1669 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 CA6P23280 308 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 DEFB133Q30KQ1 61 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 C2orf83Q53S99 150 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 OR5AN1Q8NGI8 311 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF714Q96N38 554 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ATP5G1P05496 136 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ATP5G3P48201 142 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ATP5G2Q06055 141 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 RNF138Q8WVD3 245 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 LYZL4Q96KX0 146 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 C3orf79P0CE67 100 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 GNB1P62873 340 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 KRTAP27-1Q3LI81 207 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 IL36RNQ9UBH0 155 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 PAX9P55771 341 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 PMVKQ15126 192 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM108Q6UXF1 575 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 AURKAIP1Q9NWT8 199 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-204ENST00000358025 B4GALT1P15291 398 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 GPR6P46095 362 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-204ENST00000358025 CEBPDP49716 269 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-204ENST00000358025 CAMPP49913 170 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 CCL11P51671 97 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ALKBH6Q3KRA9 238 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms