RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 GATA2P23769 480 aaPredicted RBP15.12■□□□□ 0.01
COL18A1-202ENST00000355480 LINC00114Q6XXX2 140 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 WBP1Q96G27 269 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 MYOD1P15172 320 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 CD24P25063 80 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 ZNF506Q5JVG8 444 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 ZNF414Q96IQ9 312 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 KCNS1Q96KK3 526 aa15.12■□□□□ 0.01
COL18A1-202ENST00000355480 CD8AP01732 235 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 CACNG8Q8WXS5 425 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 ZNF98A6NK75 572 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 FMC1Q96HJ9 113 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 METRNQ9UJH8 293 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 TRAV8-6A0A0B4J262 113 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 SHISA3A0PJX4 238 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 VENTXO95231 258 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 TMEM136Q6ZRR5 245 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 STHQ8IWL8 128 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 MRPL13Q9BYD1 178 aaKnown RBP15.11■□□□□ 0.01
COL18A1-202ENST00000355480 SNRNP200O75643 2136 aaKnown RBP15.11■□□□□ 0.01
COL18A1-202ENST00000355480 E9PLN8 166 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 VKORC1Q9BQB6 163 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 SCO2A0A1W2PP80 73 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 TBR1Q16650 682 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 TMEM133Q9H2Q1 129 aa15.11■□□□□ 0.01
COL18A1-202ENST00000355480 A0A1B0GTI1 187 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 ZFP36L1Q07352 338 aaKnown RBP15.1■□□□□ 0.01
COL18A1-202ENST00000355480 TOMM7Q9P0U1 55 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 SCN2AQ99250 2005 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 MIR17HGQ75NE6 70 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 SPRR3Q9UBC9 169 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 MDC1Q14676 2089 aaKnown RBP15.1■□□□□ 0.01
COL18A1-202ENST00000355480 MYOFQ9NZM1 2061 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 SPTBP11277 2137 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 SLC17A3O00476 420 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 LDLRAD2Q5SZI1 272 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 Q9H3A6 140 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 PAX1P15863 534 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 ZP1P60852 638 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 SCGB3A1Q96QR1 104 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 RTBDNQ9BSG5 229 aaPredicted RBP15.1■□□□□ 0.01
COL18A1-202ENST00000355480 CACNA1IQ9P0X4 2223 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 PARP14Q460N5 1801 aa15.1■□□□□ 0.01
COL18A1-202ENST00000355480 CACNG7P62955 275 aa15.09■□□□□ 0.01
COL18A1-202ENST00000355480 FAM71F2Q6NXP2 309 aa15.09■□□□□ 0.01
COL18A1-202ENST00000355480 GLMPQ8WWB7 406 aa15.09■□□□□ 0.01
COL18A1-202ENST00000355480 SCN10AQ9Y5Y9 1956 aa15.09■□□□□ 0.01
COL18A1-202ENST00000355480 ZDBF2Q9HCK1 2354 aa15.09■□□□□ 0.01
COL18A1-202ENST00000355480 A0A1B0GUT8 65 aa15.09■□□□□ 0.01
COL18A1-202ENST00000355480 NHLRC3Q5JS37 347 aa15.09■□□□□ 0.01
COL18A1-202ENST00000355480 TFF1P04155 84 aa15.09■□□□□ 0.01
COL18A1-202ENST00000355480 IGHV1-18A0A0C4DH31 117 aa15.08■□□□□ 0.01
COL18A1-202ENST00000355480 UPK2O00526 184 aa15.08■□□□□ 0.01
COL18A1-202ENST00000355480 SAMD13Q5VXD3 122 aa15.08■□□□□ 0.01
COL18A1-202ENST00000355480 RPP21Q9H633 154 aaKnown RBP15.08■□□□□ 0.01
COL18A1-202ENST00000355480 PINLYPA6NC86 204 aa15.08■□□□□ 0
COL18A1-202ENST00000355480 YPEL1O60688 119 aa15.08■□□□□ 0
COL18A1-202ENST00000355480 APOHP02749 345 aaPredicted RBP15.08■□□□□ 0
COL18A1-202ENST00000355480 CIARTQ8N365 385 aaPredicted RBP15.08■□□□□ 0
COL18A1-202ENST00000355480 YPEL2Q96QA6 119 aa15.08■□□□□ 0
COL18A1-202ENST00000355480 PIKFYVEQ9Y2I7 2098 aa15.08■□□□□ 0
COL18A1-202ENST00000355480 CD59P13987 128 aa15.08■□□□□ 0
COL18A1-202ENST00000355480 CDX1P47902 265 aaPredicted RBP15.08■□□□□ 0
COL18A1-202ENST00000355480 ZNF646O15015 1829 aaPredicted RBP15.08■□□□□ 0
COL18A1-202ENST00000355480 ATP5G3P48201 142 aa15.08■□□□□ 0
COL18A1-202ENST00000355480 FER1L6-AS1Q8NA97 138 aa15.08■□□□□ 0
COL18A1-202ENST00000355480 TMEM167AQ8TBQ9 72 aa15.08■□□□□ 0
COL18A1-202ENST00000355480 IL36BQ9NZH7 164 aa15.08■□□□□ 0
COL18A1-202ENST00000355480 H3BRM9 83 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 C11orf44Q8N8P7 122 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 TDGF1P13385 188 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 LRTM2Q8N967 370 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 C8orf46Q8TAG6 207 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 TRBV6-7A0A0A0MS04 114 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 ERVH48-1M5A8F1 160 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 PMCHL2Q9BQD1 86 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 TCRBV4S1A1TA0A5B7 111 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 DOCK3Q8IZD9 2030 aa15.07■□□□□ 0
COL18A1-202ENST00000355480 TRAV40A0A0B4J280 105 aa15.06■□□□□ 0
COL18A1-202ENST00000355480 RHOGP84095 191 aa15.06■□□□□ 0
COL18A1-202ENST00000355480 MORN2Q502X0 79 aa15.06■□□□□ 0
COL18A1-202ENST00000355480 CFAP161Q6P656 301 aa15.06■□□□□ 0
COL18A1-202ENST00000355480 CD7P09564 240 aa15.06■□□□□ 0
COL18A1-202ENST00000355480 NSUN5P1Q3KNT7 163 aa15.06■□□□□ 0
COL18A1-202ENST00000355480 LRRC37AA6NMS7 1700 aa15.06■□□□□ 0
COL18A1-202ENST00000355480 ATP5LO75964 103 aa15.06■□□□□ 0
COL18A1-202ENST00000355480 NRXN2Q9P2S2 1712 aa15.06■□□□□ 0
COL18A1-202ENST00000355480 IGFBP3P17936 291 aaPredicted RBP15.05■□□□□ -0
COL18A1-202ENST00000355480 FOXC2Q99958 501 aa15.05■□□□□ -0
COL18A1-202ENST00000355480 TRAV14DV4A0A0A6YYC5 116 aa15.05■□□□□ -0
COL18A1-202ENST00000355480 HOXA5P20719 270 aa15.05■□□□□ -0
COL18A1-202ENST00000355480 MPTX1A8MV57 137 aa15.05■□□□□ -0
COL18A1-202ENST00000355480 TMEM144Q7Z5S9 345 aa15.05■□□□□ -0
COL18A1-202ENST00000355480 NTN3O00634 580 aaPredicted RBP15.04■□□□□ -0
COL18A1-202ENST00000355480 ZNF497Q6ZNH5 498 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 LYZL4Q96KX0 146 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 ABCA7Q8IZY2 2146 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 LEPP41159 167 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 OTORQ9NRC9 128 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 IGLV3-32A0A0A0MS00 114 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms