RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TSPAN9O75954 239 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 PRH1P02810 166 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 RLN2P04090 185 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 SLC25A4P12235 298 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 CTRB1P17538 263 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 VAMP2P63027 116 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 SPANXN5Q5MJ07 72 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 CTRB2Q6GPI1 263 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 STPG2Q8N412 459 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 TTC9CQ8N5M4 171 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 THAP6Q8TBB0 222 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 HIPK2Q9H2X6 1198 aa14.9□□□□□ -0.02
CHMP4A-201ENST00000347519 IGSF23A1L1A6 192 aa14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 E5RGE8 158 aa14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 AP4M1O00189 453 aa14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 CRYBA1P05813 215 aa14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 CRYGCP07315 174 aa14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 RPL15P61313 204 aaKnown RBP14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 ERHP84090 104 aaKnown RBP14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 FGL1Q08830 312 aa14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 AKIRIN2Q53H80 203 aa14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 C10orf99Q6UWK7 81 aa14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 DCUN1D4Q92564 292 aa14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 CIB3Q96Q77 187 aaPredicted RBP14.89□□□□□ -0.03
CHMP4A-201ENST00000347519 FXYD6-FXYD2A0A087WZ82 144 aa14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 NPIPB5A8MRT5 1133 aa14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 FBXO24O75426 580 aa14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 PPIFP30405 207 aaKnown RBP14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 TAS2R30P59541 319 aa14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 CFHR3Q02985 330 aa14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 TMEM267Q0VDI3 215 aaPredicted RBP14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 ARSJQ5FYB0 599 aaPredicted RBP14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 HAPLN4Q86UW8 402 aa14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 SLC24A4Q8NFF2 622 aa14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 FAM110DQ8TAY7 271 aaPredicted RBP14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 BSCL2Q96G97 398 aaPredicted RBP14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 WNT10AQ9GZT5 417 aa14.88□□□□□ -0.03
CHMP4A-201ENST00000347519 TSC22D2O75157 780 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 IFNA10P01566 189 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 C1QBP02746 253 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 PET100P0DJ07 73 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 PVALBP20472 110 aaPredicted RBP14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 NPY1RP25929 384 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 P2RY1P47900 373 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 RPL23AP62750 156 aaKnown RBP14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 TMEM14EPQ6UXP3 125 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 HSD17B13Q7Z5P4 300 aaPredicted RBP14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 ZNF114Q8NC26 417 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 FANCD2OSQ96PS1 177 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 LYRM2Q9NU23 88 aaPredicted RBP14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 ZNF580Q9UK33 172 aa14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 F11RQ9Y624 299 aaKnown RBP14.87□□□□□ -0.03
CHMP4A-201ENST00000347519 PMS2P5A8MQ11 134 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 METTL15P1P0C7V9 234 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 HKR1P10072 659 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 SNCAP37840 140 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 HTR2BP41595 481 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 CAV2P51636 162 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 DEFA5Q01523 94 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 ARL16Q0P5N6 197 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 C2orf83Q53S99 150 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 PVRIGQ6DKI7 326 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 ZNF329Q86UD4 541 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 PRIMA1Q86XR5 153 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 TMEM252Q8N6L7 170 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 C16orf95Q9H693 158 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 PAIP2BQ9ULR5 123 aaKnown RBP14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 STRAPQ9Y3F4 350 aaKnown RBP14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 U3KQ87 197 aa14.86□□□□□ -0.03
CHMP4A-201ENST00000347519 BOLA2-SMG1P6H3BVE0 249 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 NDUFA7O95182 113 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 ZNF546Q86UE3 836 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 MRPL41Q8IXM3 137 aaKnown RBP14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 OR2T6Q8NHC8 308 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 LINC01006Q8NI28 216 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 TMEM68Q96MH6 324 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 TNFSF18Q9UNG2 199 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 RNF222A6NCQ9 220 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 CST7O76096 145 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 NKX2-5P52952 324 aaPredicted RBP14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 NHLH2Q02577 135 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 MLANAQ16655 118 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 SLC25A24Q6NUK1 477 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 TMEM65Q6PI78 240 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 OR1P1Q8NH06 330 aa14.85□□□□□ -0.03
CHMP4A-201ENST00000347519 JMJD1CQ15652 2540 aa14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 IGLV11-55A0A075B6I3 123 aa14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 PRSS46E5RG02 174 aa14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 ARPC5O15511 151 aa14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 LY86O95711 162 aa14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 RPL12P30050 165 aaKnown RBP14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 EWSR1Q01844 656 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 ZFP69Q49AA0 526 aa14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 LCNL1Q6ZST4 164 aa14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 NOXA1Q86UR1 476 aa14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 MS4A10Q96PG2 267 aa14.84□□□□□ -0.03
CHMP4A-201ENST00000347519 IGHV3-21A0A0B4J1V1 117 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 NDUFB8O95169 186 aa14.83□□□□□ -0.04
CHMP4A-201ENST00000347519 IGLV1-40P01703 118 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms