RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OR2C1O95371 312 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 CLEC3BP05452 202 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 SNCAP37840 140 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 GPHB5Q86YW7 130 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 FAM219AQ8IW50 185 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 Q8N402 240 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 SLC35G3Q8N808 338 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 OR2K2Q8NGT1 345 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 NAA60Q9H7X0 242 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 SLC2A8Q9NY64 477 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 S4R3C0 116 aa12.05□□□□□ -0.48
TSPAN4-201ENST00000346501 LGALS9O00182 355 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 NHLRC4P0CG21 123 aaPredicted RBP12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 ANXA3P12429 323 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 UCP1P25874 307 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 SUB1P53999 127 aaKnown RBP eCLIP12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 PRCDQ00LT1 54 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 SP6Q3SY56 376 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 GTSCR1Q86UQ5 136 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 OR1P1Q8NH06 330 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 DEDD2Q8WXF8 326 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 CCDC140Q96MF4 163 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 SOSTQ9BQB4 213 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 CACFD1Q9UGQ2 172 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 GPR132Q9UNW8 380 aa12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 LSM4Q9Y4Z0 139 aaKnown RBP12.04□□□□□ -0.48
TSPAN4-201ENST00000346501 MFSD2BA6NFX1 497 aa12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 CSN3P07498 182 aa12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 OR5AC1P0C628 307 aa12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 GPR183P32249 361 aa12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 SPSB3Q6PJ21 355 aa12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 ZNF502Q8TBZ5 544 aa12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 RBPMSQ93062 196 aaKnown RBP12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 ATP6V0BQ99437 205 aa12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 RBM38Q9H0Z9 239 aaKnown RBP12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 C21orf62Q9NYP8 219 aa12.03□□□□□ -0.48
TSPAN4-201ENST00000346501 HLA-AP01891 365 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 Q56UQ5 140 aa12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 HAPLN4Q86UW8 402 aa12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 OR2C3Q8N628 320 aa12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 UBAC2Q8NBM4 344 aa12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 MISP3Q96FF7 219 aa12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 BSCL2Q96G97 398 aaPredicted RBP12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 RTBDNQ9BSG5 229 aaPredicted RBP12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 C5orf66Q9H5L9 145 aa12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 TECRQ9NZ01 308 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.49
TSPAN4-201ENST00000346501 CRYM-AS1A6NIL9 109 aa12.01□□□□□ -0.49
TSPAN4-201ENST00000346501 CDS2O95674 445 aa12.01□□□□□ -0.49
TSPAN4-201ENST00000346501 IGKV1-5P01602 117 aa12.01□□□□□ -0.49
TSPAN4-201ENST00000346501 AKR1C4P17516 323 aa12.01□□□□□ -0.49
TSPAN4-201ENST00000346501 HOXA1P49639 335 aaPredicted RBP12.01□□□□□ -0.49
TSPAN4-201ENST00000346501 ZNF57Q68EA5 555 aaPredicted RBP12.01□□□□□ -0.49
TSPAN4-201ENST00000346501 MARC2Q969Z3 335 aa12.01□□□□□ -0.49
TSPAN4-201ENST00000346501 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.01□□□□□ -0.49
TSPAN4-201ENST00000346501 C2orf70A6NJV1 201 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 DBX1A6NMT0 343 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 CORTO00230 105 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 NUPL2O15504 423 aaKnown RBP12□□□□□ -0.49
TSPAN4-201ENST00000346501 TGOLN2O43493 480 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 SCGB2A1O75556 95 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 FOLR2P14207 255 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 MFAP4P55083 255 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 SRPXP78539 464 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 TMEM268Q5VZI3 342 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 TRIQKQ629K1 86 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 IL34Q6ZMJ4 242 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 CCDC190Q86UF4 302 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 ZNF114Q8NC26 417 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 SCARB1Q8WTV0 552 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 GLYATL2Q8WU03 294 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 SLC25A21Q9BQT8 299 aaPredicted RBP12□□□□□ -0.49
TSPAN4-201ENST00000346501 ZC4H2Q9NQZ6 224 aa12□□□□□ -0.49
TSPAN4-201ENST00000346501 OR2T8A6NH00 312 aa11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 ST8SIA3O43173 380 aa11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 ETV6P41212 452 aa11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 ELLP55199 621 aaPredicted RBP11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 RELQ04864 619 aaPredicted RBP11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 IZUMO4Q1ZYL8 232 aa11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 IL22RA2Q969J5 263 aa11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 PINX1Q96BK5 328 aaKnown RBP11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 GALNT14Q96FL9 552 aa11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 TXN2Q99757 166 aa11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 DMRT1Q9Y5R6 373 aa11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 V9GYH0 126 aa11.99□□□□□ -0.49
TSPAN4-201ENST00000346501 IGHV3-21A0A0B4J1V1 117 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 A0A0B4J293 547 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 A8MWP6 167 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 CBLN1P23435 193 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 NPBWR1P48145 328 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 SPCS3P61009 180 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 KLF9Q13886 244 aaPredicted RBP11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 GUCA2BQ16661 112 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 SPINK9Q5DT21 86 aa11.98□□□□□ -0.49
TSPAN4-201ENST00000346501 SELENOHQ8IZQ5 122 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms